Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq291 479 4e-130 seq225 284 2e-71 >seq291 Length=196152 Score = 479 bits (530), Expect = 4e-130 Identities = 1242/1860 (67%), Gaps = 49/1860 (3%) Strand=Plus/Minus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || ||||||||||| | ||| ||||| || || || ||||| |||| ||||| ||| Sbjct 78018 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 77959 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || ||| || || || ||| | || || || | || || || | || ||||| Sbjct 77958 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 77899 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 ||||||||||| || || | |||||||||||||| || || || | ||| ||| Sbjct 77898 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGATGTTTTCACGGAAATCTCC 77839 Query 62051 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGGA 62106 |||| |||||| || | |||| || | | | ||| | || || |||| || ||||| Sbjct 77838 CAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGGA 77780 Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT-CTCGGTTA 62165 ||| | | | ||||| ||||||| || ||||||| ||| | | |||||||| Sbjct 77779 TCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTTA 77720 Query 62166 AAACTC-TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 62224 | | | ||| || || |||| || ||||||||||| || || | || | || || Sbjct 77719 GATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTA 77661 Query 62225 TAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62284 |||||||| || |||||||| | |||||||| || |||| |||||| || ||||| Sbjct 77660 TAAATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAA 77601 Query 62285 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTAT 62342 ||||| ||||| || || | || ||| || | | ||| ||||| | ||||| | Sbjct 77600 GCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACC--ATGTTGCTTTATTTTCT 77543 Query 62343 CTTTTAGA--GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTG 62400 | || | ||| ||||||||||||||| | ||| || Sbjct 77542 CCTTCAATTCGGT--CCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTG 77485 Query 62401 TAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGC 62460 ||||||||| ||||| || || ||| ||| || || || | || | || ||||| Sbjct 77484 TAGAATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAGC 77425 Query 62461 TAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG 62520 || ||| ||||| || || || || || || ||||| |||||||| || | || ||| | Sbjct 77424 TAATTCGCAACTGGCTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCAA 77365 Query 62521 ATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCC 62580 | ||||| || || |||| ||| | ||||| || ||||| || || || Sbjct 77364 ACGGAATGCTTCTTCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACC 77305 Query 62581 TTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCA--GCTTCTGGAATA 62638 ||| | |||||||| || || | |||||| ||| || |||| || || || | Sbjct 77304 TTGTATGCCAATACCAATGGGACGATGTCTGAAATTCGA--TTTCCTTGCCTCCGGCAAG 77247 Query 62639 GGATAATAATTAATATCTATAATTTTATTGAGATTTC-TGACAATTACTTTGACCACATC 62697 ||||||| |||||| ||||| |||||||| ||||| | || | ||||| || || Sbjct 77246 GGATAATGATTAATGTCTATGATTTTATTCAGATTACGTGTAACGGTCTTTGTG-ACTTC 77188 Query 62698 CTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATTACAAACATGTTCAATGCAACAGA 62754 || || ||| ||| | | | | | | |||||||| ||||| || | || Sbjct 77187 TTTGAGGCGCTTAAAGTCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCGA 77128 Query 62755 TGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAG 62814 |||| || || || |||||||||| | || ||||| | || || || || | Sbjct 77127 AGCCAAGTTGCACACAGCTACCTCATCGGGTGACGAATATTCCACAATTTCGGTACATAA 77068 Query 62815 ATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 62874 |||||||||||| || || || | ||| ||||||||||||||| ||||| ||||| || Sbjct 77067 ATTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTT 77008 Query 62875 ATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 62934 ||| | ||| |||| || || || || | || ||||| ||||| ||| | | ||| Sbjct 77007 ATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGAC 76949 Query 62935 TC-GAGCCTTTATTATAG-ATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGT 62992 | | || |||||| | ||| | | || || || || | ||| ||| || | Sbjct 76948 TTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGTT-CATATTTCAGATATAACTTT 76890 Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 |||||||| || ||||| || | | | || ||||| | | |||||||| | |||| Sbjct 76889 TCGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGAC 76830 Query 63053 CACTCTCCGTCATC--CTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63109 || ||| ||||| |||| || ||||||||||| |||||||| ||||| | || ||| Sbjct 76829 CAGTCT---TCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATA-AGGCATA 76774 Query 63110 -AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 63168 || | |||||||| | ||| || || || || || || ||||| | || | || | Sbjct 76773 GAACAAATCTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTC 76714 Query 63169 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63228 | |||||||| |||||| ||||||| ||| ||||| | | || || ||||| || Sbjct 76713 GAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCC 76654 Query 63229 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 63288 || ||||| | || | || | ||||| | |||| |||||| || | | |||||| Sbjct 76653 ACCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCATT 76594 Query 63289 GGATGTACCATTGGT-CCCTGAGATATAGCTTCCACTGGCACGAAT---AT-TACTAATT 63343 ||||| | ||| || ||| | | || | || | ||||| || || ||| || Sbjct 76593 TGATGTGCTATTTGTACCCACAATTGCAG-TGCCTTTTGCACGTATGCAATGTAC--GTT 76537 Query 63344 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG-TTTTAACGTATCATA 63402 ||||| || || || || ||| || || ||||| ||| | | | | | | | | Sbjct 76536 --CAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGTGA-A 76480 Query 63403 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63462 || || || || ||| |||| |||| | |||||||| || |||| ||| | | Sbjct 76479 AATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTG 76420 Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAG 63522 |||| | ||| || | || |||||||| || ||||| | ||| ||||| | Sbjct 76419 CTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAAAGCAA 76360 Query 63523 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63582 ||||| || || || |||| || || || ||| || || | || |||||||| Sbjct 76359 GTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACACGCAT 76300 Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63642 |||||| ||||| |||| ||||| || ||| ||| | ||| | ||| ||||| ||| Sbjct 76299 TAACATATGCTGTGGTCGCTCAACAATTTTGCCGTTCAATTTTAGCAAATAGGAACGTTC 76240 Query 63643 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702 | ||||||||||||||||| || || ||| || || | |||||||| | ||||| Sbjct 76239 AAGCGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGGCATAAATAATGGCAGAGTT 76180 Score = 95.1 bits (104), Expect = 2e-14 Identities = 194/285 (68%), Gaps = 5/285 (2%) Strand=Plus/Minus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || ||||||||||| | ||| ||||| || || || ||||| |||| ||||| ||| Sbjct 85094 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 85035 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || ||| || || || ||| | || || || | || || || | || ||||| Sbjct 85034 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 84975 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 ||||||||||| || || | |||||||||||||| || || || | ||| ||| Sbjct 84974 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGATGTTTTCACGGAAATCTCC 84915 Query 62051 CAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATGGA 62106 |||| ||||| || | |||| | || | | ||| | | | |||| || ||||| Sbjct 84914 CAAACTGTTTTGTATAGATCGCGT-ATGTGCTGTGGTATGCATTCAATATTTTGTATGGA 84856 Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAA 62151 ||| | | | ||||| ||||||| || ||||||| ||| || Sbjct 84855 TCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAA 84811 >seq225 Length=233467 Score = 284 bits (314), Expect = 2e-71 Identities = 494/713 (69%), Gaps = 9/713 (1%) Strand=Plus/Minus Query 32486 AATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 32545 || ||| | ||| || |||||||| ||||| ||| | || |||||||| || || Sbjct 26888 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 26829 Query 32546 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 32605 | || || || | ||| |||| | ||||| || ||||| || || || | || Sbjct 26828 TAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 26769 Query 32606 AATAGATCTTACTGTT---TCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACA 32662 || || || || || | ||| ||| | | |||||||| ||||||||||| Sbjct 26768 TATT--TCA-ACAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACA 26712 Query 32663 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 32722 |||||| || || || || ||||| |||| ||||| ||| |||||||| || | || Sbjct 26711 TGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCC 26652 Query 32723 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAAT 32782 ||||||| ||||| || |||||||| || || || ||||| ||| |||||||| Sbjct 26651 TGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAAT 26592 Query 32783 TCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATGTA-T 32839 ||||| || || ||||| ||||| | | || ||| | ||| || | | | | Sbjct 26591 ACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAAT 26532 Query 32840 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 32899 ||| | |||||||| ||||| ||||| ||||||||||||||||||||| || Sbjct 26531 CCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAA 26472 Query 32900 GAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTC 32959 | || || ||| || || |||| |||||||||||| || | ||||||||||| Sbjct 26471 TAAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTC 26412 Query 32960 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTG 33019 ||||| | || || || || ||||||||||| |||||||| | ||||| || | || Sbjct 26411 AGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTG 26352 Query 33020 TACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 33079 ||||| || || ||||| ||| |||||||||||| || || ||| || || || Sbjct 26351 GACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAA 26292 Query 33080 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATT 33139 ||| || || || ||| ||||||| | ||| | ||||| |||||||| Sbjct 26291 AAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATC 26232 Query 33140 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 ||||||||||| | ||| ||||| | |||||||| || ||||| ||||||| Sbjct 26231 CATATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGCCT 26179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633378864016000