Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq225 298 6e-76 seq1212 132 5e-26 >seq225 Length=233467 Score = 298 bits (330), Expect = 6e-76 Identities = 512/738 (69%), Gaps = 5/738 (1%) Strand=Plus/Minus Query 92890 ATAATACTTTTCACCGATC--AACTCGTACAAT-AATCTATCAGCTACAAATTCTATGTA 92946 ||| |||||||| || || | |||| |||| || | |||||| |||||||| || || Sbjct 26916 ATATTACTTTTC-CCACTCCTAGCTCG-ACAAGCAAACGATCAGCCACAAATTCGATATA 26859 Query 92947 CTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA 93006 | ||||| | | |||||||| || | | | || || | |||||| || ||||| Sbjct 26858 ATCGGACATTAGTTTGCAATTCATACCGATTAAATTCACCGGCAAAGCGTCAGTTAAGAA 26799 Query 93007 ATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTT 93066 || | ||| ||| ||| ||||| | ||||| | | || ||| |||||| Sbjct 26798 TTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAACAATTCGCTCATTACTTGGTTT 26739 Query 93067 TTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGA 93126 ||||| | || | | |||| || || || ||||| ||| | || || |||||||| Sbjct 26738 TTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGA 26679 Query 93127 TATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATAT 93186 || | |||||| ||||| || ||||| | | || |||||||| ||||| || || Sbjct 26678 AATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGAT 26619 Query 93187 TGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||||||||||| ||| || || |||||||| ||||| |||||||| | | |||||| Sbjct 26618 CGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACGGCAGCAAATGCAATTACACGTTC 26559 Query 93247 GGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAAT 93306 |||| || || || || | ||||| | |||||||| || || ||| | Sbjct 26558 ACCAAAGTTGGCCGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTACGCTTTAC 26499 Query 93307 ACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTA 93366 ||| | ||| || ||||| || |||| ||||| | | | ||| || || || Sbjct 26498 GGCAGGCATTGTCTCTATAGCATTGAATAAGTAATTCCTTTGTTTCGAGTCCTTAATATA 26439 Query 93367 TGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCC 93426 |||||| ||||| | ||||||||||||||| ||||||||||| |||||||| ||||| Sbjct 26438 TGTATCAATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCC 26379 Query 93427 GTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTC 93486 ||||| || | || || || | || ||||| || | || | || || | |||||| Sbjct 26378 ATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAGCGTTCAACTACATTTTC 26319 Query 93487 ATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTC 93546 ||| || |||||||| ||||| || ||||| || || | || ||||||||| || Sbjct 26318 ATTCACAATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTC 26259 Query 93547 ATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGT 93606 || ||| | || ||||||| | |||||| |||||||| ||||| | || || Sbjct 26258 ATTATCAGTTAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCCCTACTGT 26199 Query 93607 CCAAAACGATGCTTCTGC 93624 ||| |||||||||||||| Sbjct 26198 CCAGAACGATGCTTCTGC 26181 >seq1212 Length=84236 Score = 132 bits (146), Expect = 5e-26 Identities = 97/112 (87%), Gaps = 8/112 (7%) Strand=Plus/Minus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGG 126319 || |||||||||||||||| |||||||||||||||||||||| |||||||||| ||| Sbjct 31735 TATAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGG 31676 Query 126320 AGCGTGGGTTCGAACCCCACACCTGACAAAT------TATTATTGGAATTTT 126365 ||||||||||||||||||||||||||||||| |||| || ||||||| Sbjct 31675 AGCGTGGGTTCGAACCCCACACCTGACAAATTCAAAATATTTTTTGAATTTT 31624 Score = 127 bits (140), Expect = 2e-24 Identities = 81/87 (93%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 30455 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 30396 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 30395 GTGGGTTCGAACCCCACACCTGACAAA 30369 Score = 123 bits (136), Expect = 3e-23 Identities = 79/85 (93%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 57290 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 57349 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 57350 GTGGGTTCGAACCCCACACCTGACA 57374 Score = 123 bits (136), Expect = 3e-23 Identities = 79/85 (93%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 57473 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 57532 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 57533 GTGGGTTCGAACCCCACACCTGACA 57557 Score = 123 bits (136), Expect = 3e-23 Identities = 79/85 (93%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 58837 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 58896 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 58897 GTGGGTTCGAACCCCACACCTGACA 58921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556638334110400