Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq225 298 6e-76
seq1212 132 5e-26
>seq225
Length=233467
Score = 298 bits (330), Expect = 6e-76
Identities = 512/738 (69%), Gaps = 5/738 (1%)
Strand=Plus/Minus
Query 92890 ATAATACTTTTCACCGATC--AACTCGTACAAT-AATCTATCAGCTACAAATTCTATGTA 92946
||| |||||||| || || | |||| |||| || | |||||| |||||||| || ||
Sbjct 26916 ATATTACTTTTC-CCACTCCTAGCTCG-ACAAGCAAACGATCAGCCACAAATTCGATATA 26859
Query 92947 CTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA 93006
| ||||| | | |||||||| || | | | || || | |||||| || |||||
Sbjct 26858 ATCGGACATTAGTTTGCAATTCATACCGATTAAATTCACCGGCAAAGCGTCAGTTAAGAA 26799
Query 93007 ATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTT 93066
|| | ||| ||| ||| ||||| | ||||| | | || ||| ||||||
Sbjct 26798 TTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAACAATTCGCTCATTACTTGGTTT 26739
Query 93067 TTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGA 93126
||||| | || | | |||| || || || ||||| ||| | || || ||||||||
Sbjct 26738 TTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGA 26679
Query 93127 TATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATAT 93186
|| | |||||| ||||| || ||||| | | || |||||||| ||||| || ||
Sbjct 26678 AATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGAT 26619
Query 93187 TGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246
||||||||||| ||| || || |||||||| ||||| |||||||| | | ||||||
Sbjct 26618 CGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACGGCAGCAAATGCAATTACACGTTC 26559
Query 93247 GGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAAT 93306
|||| || || || || | ||||| | |||||||| || || ||| |
Sbjct 26558 ACCAAAGTTGGCCGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTACGCTTTAC 26499
Query 93307 ACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTA 93366
||| | ||| || ||||| || |||| ||||| | | | ||| || || ||
Sbjct 26498 GGCAGGCATTGTCTCTATAGCATTGAATAAGTAATTCCTTTGTTTCGAGTCCTTAATATA 26439
Query 93367 TGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCC 93426
|||||| ||||| | ||||||||||||||| ||||||||||| |||||||| |||||
Sbjct 26438 TGTATCAATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCC 26379
Query 93427 GTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTC 93486
||||| || | || || || | || ||||| || | || | || || | ||||||
Sbjct 26378 ATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAGCGTTCAACTACATTTTC 26319
Query 93487 ATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTC 93546
||| || |||||||| ||||| || ||||| || || | || ||||||||| ||
Sbjct 26318 ATTCACAATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTC 26259
Query 93547 ATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGT 93606
|| ||| | || ||||||| | |||||| |||||||| ||||| | || ||
Sbjct 26258 ATTATCAGTTAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCCCTACTGT 26199
Query 93607 CCAAAACGATGCTTCTGC 93624
||| ||||||||||||||
Sbjct 26198 CCAGAACGATGCTTCTGC 26181
>seq1212
Length=84236
Score = 132 bits (146), Expect = 5e-26
Identities = 97/112 (87%), Gaps = 8/112 (7%)
Strand=Plus/Minus
Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGG 126319
|| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||
Sbjct 31735 TATAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGG 31676
Query 126320 AGCGTGGGTTCGAACCCCACACCTGACAAAT------TATTATTGGAATTTT 126365
||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct 31675 AGCGTGGGTTCGAACCCCACACCTGACAAATTCAAAATATTTTTTGAATTTT 31624
Score = 127 bits (140), Expect = 2e-24
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 30455 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 30396
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||
Sbjct 30395 GTGGGTTCGAACCCCACACCTGACAAA 30369
Score = 123 bits (136), Expect = 3e-23
Identities = 79/85 (93%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 57290 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 57349
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||||
Sbjct 57350 GTGGGTTCGAACCCCACACCTGACA 57374
Score = 123 bits (136), Expect = 3e-23
Identities = 79/85 (93%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 57473 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 57532
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||||
Sbjct 57533 GTGGGTTCGAACCCCACACCTGACA 57557
Score = 123 bits (136), Expect = 3e-23
Identities = 79/85 (93%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 58837 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 58896
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||||
Sbjct 58897 GTGGGTTCGAACCCCACACCTGACA 58921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556638334110400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |