Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq291 291 7e-74 seq749 168 6e-37 seq1128 131 1e-25 seq2732 116 3e-21 >seq291 Length=196152 Score = 291 bits (322), Expect = 7e-74 Identities = 1032/1582 (65%), Gaps = 63/1582 (4%) Strand=Plus/Minus Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838 || ||||| ||||||| ||||| | || || || || || |||||||| |||||||| Sbjct 78048 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 77989 Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898 || || | ||| ||||| || | || || | || | | | ||| |||| Sbjct 77988 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGGGC 77929 Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958 | | || || || || || ||||| ||||| || || | || ||||| |||||| Sbjct 77928 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAGCC 77869 Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018 || ||| | ||||||| || ||||| || |||||||| || || | | ||| Sbjct 77868 ATTTTGATCGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 77809 Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078 | |||||| |||||| || || | | ||| | | ||||| || || ||| Sbjct 77808 TGTGGTATGGATTCAATATTTTGTATGGATCCGCGACTGGTTATAATATTATTCTTCATA 77749 Query 129079 TGTTCGTTGTACA-AATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTG 129137 | || | ||| | || | | | | |||| ||||| | |||| ||||| Sbjct 77748 TCATCATCCCACAGNACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACTTG 77689 Query 129138 AAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTC 129197 ||| ||||||| | || || || ||||| ||| ||| |||| ||||| || || Sbjct 77688 AAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAAGTGTACGGTTCAAATGACTC 77629 Query 129198 ATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCAC--GCAAAGCGAG 129255 ||||||||| | ||||| || |||| || || |||||| || | |||||| || Sbjct 77628 ATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAG--AG 77571 Query 129256 TTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGAT--G 129313 || || | ||| || || || || | | || |||| ||||| | ||| | ||| | Sbjct 77570 TTGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAA--GATCAG 77513 Query 129314 TGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGT 129373 | ||||| | || ||||| ||| || || | |||||| ||| |||| || | | Sbjct 77512 TTGGTGTTTTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGG--TGAACCTTT 77455 Query 129374 AG--GAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAA 129431 | | || | ||| || || || ||||||||||| |||||||| |||||| | Sbjct 77454 ATACGTTTCATAGGTGCCATAGTTTTCAGCTAATTCGCAACTGGCTTCCAAGGCGCCATA 77395 Query 129432 ATAAATTGTTTCGGCAAT-TTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGTACGGC 129489 ||||| |||||| ||| |||| || ||||| || | || |||||||| || Sbjct 77394 GTAAATAGTTTCG--AATATTTGCTGATTCAAACGGAATGCTTCTTCACTTTCGTATGGG 77337 Query 129490 ATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGT 129549 ||||| | || | |||||| |||||||| || || | ||| ||||| |||||| Sbjct 77336 TAACGCATTAGAATTAAAGCGTCGGCAAAACCTTGTATGCCAATACCAATGGGACGATGT 77277 Query 129550 TTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTT 129609 | ||| ||||| |||| | ||||||||| | || |||||||| ||||| || Sbjct 77276 CTGAAATTCGATTTCCTTGCCTCCGGCAAGGGATAATGATTAATGTCTATGATTTTATTC 77217 Query 129610 AAATT-CTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTAC 129668 | ||| | || || | || || || | ||| | | ||| | ||| | | | Sbjct 77216 AGATTACGTGTA-ACGGTCTTTGTGACTTCTTTGAGGCGCTTAAAGTCATAC--GTTTTC 77160 Query 129669 ATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGC-ACTT--TC 129725 | ||| |||||| ||| | ||||| ||||| ||||| || || || | || Sbjct 77159 TCGGGTGT-GACAAACATATTCAAGGCGATCGAAGCCAAGTTGCACACAGCTACCTCATC 77101 Query 129726 GTTTTTGTCACTG-TACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCA 129784 | || || || || |||||||||| || ||||||||| ||||| ||||| | Sbjct 77100 GG----GTGACGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAA 77045 Query 129785 AATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCG 129844 || || ||||||||| || || ||||||||||| |||| |||||| || ||||| | Sbjct 77044 CATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGG 76985 Query 129845 TTTCGACTTGCGTTTCGACAATGGTCCTGAAC--AAGTCTC-GAGCCTTGATCTGTCTTA 129901 | || ||||||| ||| | |||| || ||| ||| || | || || || | ||||| Sbjct 76984 TCTCCACTTGCGATTCAATAATG---CTAAACCAAAGACTTTGTGCTTTTATTT-TCTTA 76929 Query 129902 CAAATTTGCCACAT--TTC----TCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGT 129955 ||| ||| | ||| || ||| || ||| | | ||| || ||| || Sbjct 76928 -----TTGGCACGTCCTTCCTGTTCATATTTCAGATATAACTTTTCGAACTCTTCACCCC 76874 Query 129956 GTACGGTGTCGAGCAACGGCGATTCAC----GCGGACACATCAAACTCCACATTCCATCC 130011 ||| | | ||| | || ||| | |||||||| | ||| | |||| Sbjct 76873 ATACTTCATGTA--AACCGGGA--CACTTGTGTGGACACATTAGCGACCAGTCTTCATCG 76818 Query 130012 GCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTC--GCG 130069 ||||| || ||||||||||| | ||| |||| ||| | ||| || |||||||||| ||| Sbjct 76817 GCTTCTACACGTTTCATAAATAGATCAGGTATCCATAAGGCATAGAACAAATCTCTGGCG 76758 Query 130070 CTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGT 130129 | | || | || | || |||| ||||| ||| | || ||| |||| || || | Sbjct 76757 CGATGCTCTTCTTTG--CCAGTGTTTTTTTTCAATTCCAAAAATTCGAAAATATCAGCAT 76700 Query 130130 GCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTT---GCCCCCTTGGTCAACGT 130186 |||| ||||| | || || || | ||||| ||||| ||| ||||| || || | Sbjct 76699 GCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTTGATCCACAT 76640 Query 130187 GGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTG 130246 ||| | ||| ||| | ||||||||||| | | |||| || || | |||| |||| Sbjct 76639 AGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCATTTGATGTGCTATTTG 76580 Query 130247 TGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGC 130306 | | | |||| | |||| || || | | ||| ||| | ||||| || ||||| Sbjct 76579 TACCCACAATTGCAGTGCCTTTTGCACGTATGCAATGTACGTTCAGACCAATACCGCCAG 76520 Query 130307 CAAATTTTGATATCAACGCGCA 130328 || |||| || ||||| || || Sbjct 76519 CAGATTTGGAAATCAATGCACA 76498 >seq749 Length=113903 Score = 168 bits (186), Expect = 6e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || |||||||| || || ||||| ||||| | || || || | || Sbjct 938 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 879 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || ||||| ||||||||||| ||||| || || || || |||||| Sbjct 878 GATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 819 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || ||||||||||| |||||| ||||| | ||||| || || Sbjct 818 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAAT 759 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| |||||||| ||||||||||| | || || || || ||| Sbjct 758 ATTCAAAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGGT 711 Score = 163 bits (180), Expect = 2e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||||||||| || |||||||| | ||||| || || ||| | || Sbjct 710 ATGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCC 651 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | ||| ||||||||| ||||||||||||||||| || |||||| Sbjct 650 GATACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCAA 591 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || ||||| || || || || || || ||| | |||||||||||| Sbjct 590 CAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAAC 531 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || ||||| | ||||| ||| Sbjct 530 ATCCAAAAGGAATCTACTCTTCACTTGGTATTGCGTCTCCGCGGTGGT 483 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || |||||||| || || || || || || || || || ||||||| || || ||| | Sbjct 1169 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 1110 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 ||||||| | || || | ||| || ||||||||||| || || || || || ||| Sbjct 1109 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 1050 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||||||| | || |||||||| ||||| | || || ||||| | ||||||||| Sbjct 1049 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 990 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTT 22428 ||||| || || || || || | ||||| ||| Sbjct 989 AACATCCAGAAGGAGTCTACACTTCATTTGGTT 957 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| ||||| ||||| | ||||| || | | Sbjct 482 ATGCAAATCTTCGTAAAGACCCTCACCGGCAAAACCATCACTTTGGAAGTTGAGCCTTCA 423 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || ||||| |||||||||||||| || |||||| Sbjct 422 GATACCATTGAGAACGTAAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCAGATCAA 363 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || ||||| || || || ||||| ||||| | ||||| |||||| Sbjct 362 CAACGTTTGATCTTCGCCGGTAAGCAATTGGAGGACGGACGCACATTGTCCGACTACAAC 303 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || || || || || || | || || || ||||| Sbjct 302 ATCCAGAAGGAGTCTACTCTTCACTTGGTATTGCG 268 Score = 111 bits (122), Expect = 1e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || ||||| | || | || || ||| | | Sbjct 254 ATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTCA 195 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || ||||| ||||| || ||||| || ||||| Sbjct 194 GATACCATTGAGAACGTTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCAGATCAG 135 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || ||||||||||| || ||||| || ||| | |||||||||||| Sbjct 134 CAACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACAAC 75 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || |||||||| || || | || || || ||||| | || || ||| Sbjct 74 ATCCAAAAAGAGTCTACTCTTCACTTGGTATTGCGTCTCCGTGGTGGT 27 >seq1128 Length=88325 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | ||||| ||||| |||| | ||||| || | | Sbjct 111 ATGCAAATCTTCGTGAAGACTCTCACCGGCAAAACAATCACCTTGGAAGTTGAGCCTTCG 170 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || ||||| ||||| ||||| |||||||| || ||||| |||||| Sbjct 171 GATACCATTGAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGAATCCCACCAGATCAA 230 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || |||||||| || | |||||| || || | ||||| ||||| Sbjct 231 CAACGTTTGATCTTCGCCGGCAAGCAACTTGAGGATGGACGTACTTTGTCCGACTACAAT 290 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| || | ||||| || | || | |||||||| Sbjct 291 ATACAGAAGGAATCGACACTCCATTTGGTGCTACGTCTTCGCGGAGG 337 >seq2732 Length=47336 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || ||||| | || ||||| || |||||||||| || || | | Sbjct 1832 ATGCAAATATTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTCG 1773 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||||||||| ||||| || ||||| || |||||| Sbjct 1772 GATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCGCCTGATCAA 1713 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || |||||||| || || || || ||| ||||| | | || || || Sbjct 1712 CAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATAAT 1653 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| ||||| || || | |||||||| Sbjct 1652 ATTCAGAAAGAGTCTACATTGCATTTAGT 1624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419564510697400