Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq749 196 9e-45
seq609 154 3e-32
seq1128 143 5e-29
>seq749
Length=113903
Score = 196 bits (216), Expect = 9e-45
Identities = 180/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||||||||||||| || || ||||||||||||||||| ||||||||
Sbjct 28 CCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGAC 87
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || || || || || || |||||||| || | | ||| || || || |||
Sbjct 88 AAGGTACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGA 147
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||| ||||| ||||| ||||| ||| ||| ||||| |||| | ||| ||
Sbjct 148 ATGCCTTCCTTATCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACN 207
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||||||| |||||||| || ||||||||||| ||||| || ||||||
Sbjct 208 TCCAAGGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCATT 255
Score = 188 bits (208), Expect = 1e-42
Identities = 179/229 (78%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || || || |||||||||||||| || || ||||| || |||||||| || ||||
Sbjct 254 TTCCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGG 313
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| | ||| | || || || || ||||| |||||||| || | | |||||| || || |
Sbjct 314 ACAATGTGCGTCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAG 373
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
|||| || ||||| ||||| ||||| ||||| ||| ||| ||||| |||| | || |
Sbjct 374 GAATACCCTCCTTATCTTGGATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAA 433
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||||| ||||||||||| || ||||||||||| ||||| || |||||
Sbjct 434 CTTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || | ||| | || || ||||| ||||| || ||||| || ||||| |||||
Sbjct 712 CCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGAC 771
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | ||||| || ||||| || || ||||| || | | |||||| || || ||
Sbjct 772 AGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGG 831
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||| |||||||| || || ||||| ||| ||||| || | | || ||
Sbjct 832 ATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACC 891
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||||||||||||||| | || |||||||| ||||||||
Sbjct 892 TCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 938
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || |||||||||||||| || || || || ||||||||||| ||||||||
Sbjct 484 CCACCGCGGAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGAC 543
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || ||||| || ||||| |||||||| || | | |||||| || || |||
Sbjct 544 AAGGTACGTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGA 603
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| ||||| ||||| || ||| || || || || | | ||| ||
Sbjct 604 ATACCCTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACC 663
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || ||||| ||||| | || || ||||| || |||||
Sbjct 664 TCCAGAGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||| || || || ||||| || |||||||| ||||||||
Sbjct 940 CCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGAC 999
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | || || ||||| || || | | |||||| || || ||
Sbjct 1000 AGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGG 1059
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||| |||||||||||||| || || || || || || || | || ||| ||
Sbjct 1060 ATTCCTTCTTTGTCTTGAATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACC 1119
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|||| |||||||| || || || | |||||| ||||| || |||||| ||
Sbjct 1120 TCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATTTTG 1170
>seq609
Length=128410
Score = 154 bits (170), Expect = 3e-32
Identities = 174/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| |||| ||||| || || || ||||| ||||||||||| || |||||
Sbjct 92970 CCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGAC 92911
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||||| || || || |||||||| || | | ||||| || || ||
Sbjct 92910 AAGGTACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGG 92851
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || || |||||||| || || || ||||| ||||||||||| | | || ||
Sbjct 92850 ATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACC 92791
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467
|| ||||||||||| || || || | ||| |||||||| ||||||||| ||||
Sbjct 92790 TCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTTGCT 92738
>seq1128
Length=88325
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||||||||| || | ||||| || || || || || || || || || || |||||
Sbjct 337 CCTCCGCGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGAC 278
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | ||||| |||||||| || | | |||||| || |||||
Sbjct 277 AAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 218
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| ||||| || || || ||||| ||| ||||| || | | || |||
Sbjct 217 ATTCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACT 158
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||||||||| ||||| || ||||| ||||| ||||| || |||||
Sbjct 157 TCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921254211851200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |