Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq749 131 1e-25
seq609 118 9e-22
seq1128 89.7 4e-13
seq2732 87.8 2e-12
>seq749
Length=113903
Score = 131 bits (144), Expect = 1e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | ||| || || || | |||||||| ||||| ||||||||||||
Sbjct 481 ATACCACCGCGGAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCG 540
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||||| ||||| | ||| ||||| ||| |||| | ||| ||||| || |||
Sbjct 541 GACAAGGTACGTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGA 600
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
||||| || || ||||| ||| ||||| |||| | | ||||| || |||| | |||
Sbjct 601 GGAATACCCTCCTTGTCCTGAAT-TTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTC 659
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| || |||| |||||| || || || |||||
Sbjct 660 AACCTCCAGAGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || |||||||| | | ||| ||||| | ||||| || || || ||||||||||||
Sbjct 937 ATGCCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCG 996
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| || ||||| ||||||||||| || |||| | ||| ||||| || ||
Sbjct 997 GACAGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGG 1056
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||||||||| |||||| ||| | | ||||| || |||| | |||
Sbjct 1057 GGGATTCCTTCTTTGTCTTGAATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCA 1116
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| |||| || || || || || |||||
Sbjct 1117 ACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 1166
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||||| | | ||||||||||| || ||||| |||||||| || || |||
Sbjct 709 ATACCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCG 768
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || | ||||| |||||| | || | ||| ||||| || ||
Sbjct 769 GACAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGG 828
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| || || ||| || ||| | | |||| ||| |||| | ||
Sbjct 829 GGGATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCA 888
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||| || | ||||| || |||| |||||| || ||||||||||||
Sbjct 889 ACCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 939
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || || || | ||||| |||||||| ||||||||||||
Sbjct 25 ATACCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCG 84
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||||| || || | |||||| || ||| |||| | ||| || || || ||
Sbjct 85 GACAAGGTACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGG 144
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| || || ||||| || | | |||| ||| || | | |||
Sbjct 145 GGAATGCCTTCCTTATCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCA 204
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | |||||||| || || || || || || || |||||
Sbjct 205 ACNTCCAAGGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | ||| || || || | ||||| || || || |||||||| |||
Sbjct 253 ATTCCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCG 312
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || || || | ||| ||||| ||| |||| | ||| ||||| || |||
Sbjct 313 GACAATGTGCGTCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGA 372
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || || || ||||| |||| | |||| ||| || | | ||
Sbjct 373 GGAATACCCTCCTTATCTTGGATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCA 432
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||||||||| || || ||||| || || |||||
Sbjct 433 ACTTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482
>seq609
Length=128410
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | || ||| ||||| | || || || ||||| |||||||| |||
Sbjct 92973 ATACCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCG 92914
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| |||||| |||||| | |||||| || ||| |||| | ||||||||| || ||
Sbjct 92913 GACAAGGTACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGG 92854
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || |||||||| || || ||| | | ||| | |||||| | | |||
Sbjct 92853 GGGATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCG 92794
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || || || | ||||| || |||||||||||
Sbjct 92793 ACCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744
>seq1128
Length=88325
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
|| ||||| | || ||||| || || || ||||| ||| || |||||| ||| |||
Sbjct 319 ACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCA 260
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
||||| || || ||| |||| | ||| ||||| || || || || || || || ||
Sbjct 259 AGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGG 200
Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353
|| || ||| | | |||| ||| || | | || || |||| ||| | ||||||
Sbjct 199 ATTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTTTG 140
Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||| ||||| || || || || |||||
Sbjct 139 CCGGTGAGAGTCTTCACGAAGATTTGCAT 111
>seq2732
Length=47336
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
|||||||| | ||||| ||||| ||||| || || || || || ||| ||||||
Sbjct 1624 ACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCC 1683
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
| ||| || || || | || ||||||||||| || || ||||| ||||| || || |
Sbjct 1684 AATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGA 1743
Query 114294 ATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352
|| ||| | ||| | ||||||| || || | | || || || | || | || ||
Sbjct 1744 AT-TTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTT 1802
Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAA 114389
|| || || |||||||| || || ||||| ||| ||
Sbjct 1803 ACCCGTAAGGGTTTTTACGAATATTTGCATTGCTGAA 1839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419970752399520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |