Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_009015.1 Length=72415 Score E Sequences producing significant alignments: (Bits) Value seq2983 122 4e-23 >seq2983 Length=44036 Score = 122 bits (134), Expect = 4e-23 Identities = 283/421 (67%), Gaps = 13/421 (3%) Strand=Plus/Minus Query 61424 GGATCGTTCAGGAAACCGAACGTCCGATTG---CCGTTCTTGCCTTCCCAGCCGTAGAAG 61480 |||||||||||||| || ||||| || ||| ||||| || |||| || ||| Sbjct 14386 GGATCGTTCAGGAAGCCAAACGTACGGTTGGTACCGTTGTTAA------AGCCATAAAAG 14333 Query 61481 CCGATGGCGTTGCGCATGATCTCAAGCTGAACCGCAGCGCCTTGACGCTTCACTTCAGCC 61540 ||||| |||| || ||| || ||||| | | ||| |||||| | || Sbjct 14332 CCGATTTCGTTACGGCGGATTTCCAGCTGCTCAGTGACGCTCGCGCGCTTCTCGGACGCG 14273 Query 61541 GAATTGATGCGCAT-CGCGCTCGCGCGGCCTTCTTCGAGCAGGCCGACTTGAATCCCCAT 61599 |||||||||||| || || | |||| ||||||| ||||| || || | || |||| Sbjct 14272 GAATTGATGCGCGCACGGGCG-GTGCGGGCTTCTTCCAGCAGACCAACGTTAAAGCCCAG 14214 Query 61600 TTCGCCGCGAACGATCGTGCGACGCTCGAAGTTCACGTTCCACGAGGAAAGGGGAATGTT 61659 ||| ||| |||| ||| |||| || |||| ||||||| || || ||||| || Sbjct 14213 CTCGAAGCGTACGACCGTACGACCTTCATAGTTAGCGTTCCAGCTGGTCAGCGGAATATT 14154 Query 61660 CGTCAGG-TCGCCGTACTCCATCGCCGTACCTGCCGGCTCGACGATACCCTGAACGATTT 61718 | || ||| |||| || ||| || | | || | |||||| |||| || Sbjct 14153 -GCCATAATCGGAGTACGGCAGCGCGCCGCCCAGCAGTTCCATAGAACCCTGTACGACTT 14095 Query 61719 CTTGATCTTCCCACGAGCCGACCGTCTTGACGCCGAGAATCTCGTCGATCTTGCGCGCCG 61778 ||| ||||||||||| |||| ||| | ||||| || ||||||| || || | Sbjct 14094 CTTCGTCTTCCCACGATCCGATGGTCGCCAGGCCGACAAGGGCGTCGATTTTACGTACAC 14035 Query 61779 AGGTCAGCACCTTCACGAAGCCCGGAAGCCATTGTTGCAGGAACTGAATCGGCGTCGGGA 61838 ||| | | |||||||||||| ||||||| || | |||||| |||||||||| || Sbjct 14034 CGGTAATGAAGCGCACGAAGCCCGGGAGCCATTCCTGTAAGAACTGGATCGGCGTCGCGA 13975 Query 61839 T 61839 | Sbjct 13974 T 13974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231512987658560