Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2312 113 5e-20 >seq2312 Length=53118 Score = 113 bits (124), Expect = 5e-20 Identities = 246/363 (68%), Gaps = 8/363 (2%) Strand=Plus/Plus Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785 |||||||||||||||| || | || ||||| | ||||||||| | |||| ||||| Sbjct 32139 AACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTATAATTGGTATATACC 32198 Query 171786 AGTCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845 | | |||||||||| | ||||||||| | || | | || || ||||| | Sbjct 32199 ACTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTTAACAACGGATCGTCGGCTG 32258 Query 171846 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTT--GTGAAGATGTACCT--CGTTTGA 171901 | | || || || | || ||||| || ||||| || || | || | | Sbjct 32259 GGTGGAATATGAGTCGCG--TCAAGGGTGACATTAAGGTGAAAATATAACGAGCGCTCGC 32316 Query 171902 GACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTG 171961 || |||||| |||||| ||||| || ||||||||||||| || || | | ||| Sbjct 32317 -ACA-ATCTTTACCACCCTGCAGACGTGTACCAAATTGACCACGAGGCTCCAATAAATTA 32374 Query 171962 ATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACT 172021 ||||| ||||| |||| ||| | | ||||| ||||| || ||| || || || | Sbjct 32375 ATATTATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATC 32434 Query 172022 TCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATC 172081 || |||||||||||||| ||| | || || ||| | | | ||| || || || |||| | Sbjct 32435 TCGCCGTGATGGTAGGCGGACATTTCAGCCACAGAACCAGACAATTGCGCAACTTTCACC 32494 Query 172082 TCA 172084 ||| Sbjct 32495 TCA 32497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597114957236800