Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4668 87.8 2e-12 seq664 87.8 2e-12 seq1128 86.0 7e-12 seq494 86.0 7e-12 seq15327 84.2 2e-11 seq769 82.4 8e-11 seq749 82.4 8e-11 >seq4668 Length=29010 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 || |||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 26005 AATATTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 25946 Query 57059 CACCACTATACTACCGAGGATTG 57081 |||||||||||| |||||| || Sbjct 25945 GACCACTATACTATCGAGGACTG 25923 >seq664 Length=122620 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 ||||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 46845 TTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 46786 Query 57064 CTATACTACCGAGGAT 57079 |||||||| ||||||| Sbjct 46785 CTATACTATCGAGGAT 46770 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 47515 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 47456 Query 57067 TACTACCGAGGATTGA 57082 ||||| |||||||||| Sbjct 47455 TACTATCGAGGATTGA 47440 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 56994 TATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 |||| | || | ||||| || | | ||| |||||| ||||||||||||||||||||| Sbjct 47040 TATGTATAACTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGG 47099 Query 57054 ATACTCACCACTATACTACCGAGGA 57078 ||||| |||||||||||| |||||| Sbjct 47100 ATACTGACCACTATACTATCGAGGA 47124 >seq1128 Length=88325 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | ||| | ||||||||| | ||| ||||| || |||||||| || | | Sbjct 337 CCTCCGCGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGAC 278 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | ||| || | || || || ||||| || ||||| || | || || || || | ||| Sbjct 277 AAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 218 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||| || |||||| ||||| || | | || || | || || Sbjct 217 ATTCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACT 158 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| |||||||| || || ||||| || ||||||||||| Sbjct 157 TCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 111 >seq494 Length=143403 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 ||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 135075 TTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 135016 Query 57063 ACTATACTACCGAGGAT 57079 ||||||||| ||||||| Sbjct 135015 ACTATACTATCGAGGAT 134999 >seq15327 Length=1742 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 ||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 959 TTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 900 Query 57063 ACTATACTACCGAGGATTG 57081 ||||||||| |||||| || Sbjct 899 ACTATACTATCGAGGACTG 881 >seq769 Length=112491 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 107108 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 107167 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 107168 TACTATCGAGGACTG 107182 >seq749 Length=113903 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| ||||| || | || |||||||| || |||||||| | || || || | Sbjct 495 ACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCC 554 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || | |||||||| ||||| || | || || || || | || | | |||||| Sbjct 555 GTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTT 614 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| |||||| || | ||| || || ||| | ||| || || | || | Sbjct 615 GTCC-TGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAA 673 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | ||||| ||||| | || || || ||||||||||| Sbjct 674 TTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542995786486400