Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq291 187 2e-42 seq2732 116 4e-21 seq749 109 5e-19 seq1128 89.7 5e-13 >seq291 Length=196152 Score = 187 bits (206), Expect = 2e-42 Identities = 933/1469 (64%), Gaps = 51/1469 (3%) Strand=Plus/Minus Query 153664 TGCTGCATTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAAT 153723 ||| || ||| ||||| |||||| || |||| || || ||||| || |||||||||| Sbjct 78056 TGCGGCCTTTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAAT 77997 Query 153724 ACATGCCGGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAA-TAACGCG 153782 ||||||| || || | ||| ||||| || | || | ||| | | || | Sbjct 77996 ACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTAC-CA 77938 Query 153783 AAACTGGGCTGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGA 153842 | |||||| || | | ||| |||||||| |||||||||||||| || || ||| Sbjct 77937 TAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGA 77878 Query 153843 TCGGCCGCCATGTCAATCAA-GTTTTTACTGCTCATTTCCCACACAGTTTTGTA--GACG 153899 || || ||||| | ||| | ||||| || | || ||||| ||||||||||| || Sbjct 77877 TCTGCAGCCATTTTGATCGATGTTTTCACGGAA-ATCTCCCAAACAGTTTTGTATAGATC 77819 Query 153900 GCTTTAATGTCGTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCG-GCC--GCTATA 153956 || | |||| | |||||| ||||| || || | || |||| | | | |||| Sbjct 77818 GCGT--ATGTGCTGTGGTATGGATTCAATATTTTGTA---TGGATCCGCGACTGGTTATA 77764 Query 153957 ATGGAATTGCGCATGTGGTCGTCGTACA--AATTTAGTCGACATAAATCTTCAACCAAGT 154014 || ||| ||| | || || ||| | | ||| || ||| | ||||| Sbjct 77763 ATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGT-TAGATCGCGTAACAAGT 77705 Query 154015 GCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGA 154074 | || || | |||||||| || || | | || || || ||| | |||| ||| Sbjct 77704 GATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAAGTGT 77645 Query 154075 ACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACG 154134 |||| || || || || |||||||| | ||||| ||||| | || || ||||| || Sbjct 77644 ACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCG 77585 Query 154135 CCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAAT 154194 | | || ||||||||| || | ||| |||| || | || || || | ||||| Sbjct 77584 CAAGCAGCAAAGAGTTGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAAT 77525 Query 154195 TCCACA----AGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250 |||| | ||||||| ||| | | ||||||||| || || | || |||| ||| Sbjct 77524 TCCAAAGATCAGTTGGT--GTTTTA--TCCCACATGTCATACTGTAGAATACCCTTACTA 77469 Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTT--GCCAAGTCGCAACTGG 154308 | || | |||| | || | || | |||||| || || |||||||||| Sbjct 77468 ACGGGTGAACCTTTATACGTTTCATAGGTGCCAT--AGTTTTCAGCTAATTCGCAACTGG 77411 Query 154309 CTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGT 154368 |||| || || ||||||| | |||||| ||||| | || || |||| | Sbjct 77410 CTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCAAACGGAATGCTTCTT 77351 Query 154369 CACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTC 154428 |||||||||| || | | || || | ||||| ||||| | ||||| ||||| | | Sbjct 77350 CACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACCTTGTATGCCAATAC 77291 Query 154429 CAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAATAATTGATAT 154488 ||| ||| | ||| | |||||||||| | || || || ||||||| ||| || | Sbjct 77290 CAATGGGACGATGTCTGAAATTCGATTTCCTTGCCTCCGGCAAGGGATAATGATTAATGT 77231 Query 154489 CGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNnnnnnnnnNATGCG-ACAAAA 154547 | || |||||||| | | ||| ||| Sbjct 77230 CTATGATTTTATTCA-GATTACGTGTAACGGTCTTTGTGACTTCTTTGAGGCGCTTAAAG 77172 Query 154548 TCAAACACT---CCGCTTTTAATAAAACGATTTACACACACAGACGCCAAGTTGCAAACG 154604 ||| || | || | | | ||| ||| | | || ||||||||||| || Sbjct 77171 TCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCGAAGCCAAGTTGCACACA 77112 Query 154605 GCAATTTCTTCAG--AACTACTGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAA 154662 || | || || | || | |||| ||||||||| | || |||||||| || || Sbjct 77111 GCTACCTCATCGGGTGACGA--ATATTCCACAATTTCGGTACATAAATTACTACACTTAA 77054 Query 154663 TGGTGCCCAGGTTTTTCTGATT-CGATTT-GATGTTGCATGCGTCTTTGTACAAAATGTA 154720 | ||||| | || | ||||| | ||| || || || || ||||| ||||| ||||| Sbjct 77053 TTGTGCCAACATTCTGTTGATTACTCTTTCGA--TTACAAGCATCTTTATACAACATGTA 76996 Query 154721 CGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAAC---AGACTTCGCGCCTC 154777 || ||||| || |||||||| | |||||||| ||| |||| |||||| | || | Sbjct 76995 TGGTGTGCCGGTCTCCACTTGCGATTCAATAA---TGCTAAACCAAAGACTTTGTGCTTT 76939 Query 154778 AACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAAACTCTAA 154837 | || | | || ||| ||||||| || | ||||| |||||| Sbjct 76938 TATTTTCTTATTGGCACGTCCTTCCTGTTCATATTTCAGATATAACTTTTCGAACTCTTC 76879 Query 154838 ACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCACATTTCGTT 154897 || | || || ||||||||||| || |||||||| | ||||| ||| | Sbjct 76878 ACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGACCAGTCTTCATC 76819 Query 154898 TTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGC 154957 || ||| ||||||||||| | ||| || | ||| || || || |||||||| | || Sbjct 76818 GGCTTCTACACGTTTCATAAATAGATCAGGTATCCATAAGGCATAGAACAAATCTCTGGC 76759 Query 154958 CTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATATGTCGGCGTG 155017 | ||||| ||| ||||| || || | |||||| || | || || || || Sbjct 76758 GCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTCGAAAATATCAGCATG 76699 Query 155018 CCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTT---TCCTCCTTGATCCACGTG 155074 ||| || || | || | ||| | |||||| ||||| || ||||||||||| | Sbjct 76698 CCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTTGATCCACATA 76639 Query 155075 ACGCACACAATTATTGTACACGCGCAACA 155103 || | ||||||| |||| ||||||| Sbjct 76638 GCGTGCTATATTATTGAACACTCGCAACA 76610 >seq2732 Length=47336 Score = 116 bits (128), Expect = 4e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||| | || || ||||| ||||| || || || || | ||||| | || Sbjct 1620 AAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATC 1679 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | ||||| |||||| |||| || ||||| || || || ||||||||||| || || Sbjct 1680 TTCCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATC 1739 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| ||||| ||| ||| || | ||||| | || || || | ||| | ||| Sbjct 1740 TTGAATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGT 1799 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| || || | ||||||||||| ||||||||| Sbjct 1800 CTTACCCGTAAGGGTTTTTACGAATATTTGCATT 1833 >seq749 Length=113903 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||||| || || || || || ||||||||||| | | ||||| |||| Sbjct 954 AAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTC 1013 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| || || || |||||| | || | || || || || || || ||||||||||| || Sbjct 1014 TTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTC 1073 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 ||| | | || ||||| ||| || | ||||| | || || || | ||| | || Sbjct 1074 TTG-AATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGG 1132 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||||| ||||| || || ||||| ||||||||||| Sbjct 1133 TCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATTTT 1169 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| ||||||||||| | | ||| || ||||||| | ||| Sbjct 508 TGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCTTCCAATTGC 567 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| | || | || || || || |||||||| || || || || || | |||| Sbjct 568 TTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTGTCCTG-AATTTT 626 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 |||||| || || | |||||| | || || || | ||| | || || || || Sbjct 627 TGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATTGTTTTACCCGT 686 Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| ||||| |||||||| Sbjct 687 CAAAGTTTTAACGAAGATTTGCAT 710 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || || | || |||| ||| | || ||||| |||||||| || || || | Sbjct 711 ACCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGA 770 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || | ||| ||||| || |||| | || || || || || || Sbjct 771 CAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGG 830 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 |||||||| || ||||| ||||| ||||| ||| ||| | ||||| | || | Sbjct 831 GATTCCTTCCTTATCTTGAATTTTA-GCTTTGACATTCTCAATGGTATCGGAAGGCTCAA 889 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | ||| | ||| || || ||||||||||| |||||||| ||||| Sbjct 890 CCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 938 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || |||||||| ||||||||||| | | ||| || |||| || | || Sbjct 52 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCCTCCAATTGT 111 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 |||||||| | || | || ||||| || || ||||| ||||| || ||||| || || Sbjct 112 TTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTATCTTGGATCTTA 171 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || ||| | ||||| | || || || | || | ||| ||||| || Sbjct 172 GCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATGGTTTTGCCAGTG 231 Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444 | || || ||||| ||||||||| Sbjct 232 AGGGTCTTCACGAAGATTTGCATT 255 >seq1128 Length=88325 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | ||| | |||||||| || || || ||||| || | | || || | || Sbjct 322 AGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCC 263 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| ||||||||||| | || | || || || || || || ||||| || || ||| Sbjct 262 TCAAGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCT 203 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| ||| ||| | ||||| | || ||||| | || | || Sbjct 202 TGGA-TTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGT 144 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | ||| || ||||| |||||||| Sbjct 143 TTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499445191902400