Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq291 187 2e-42
seq2732 116 4e-21
seq749 109 5e-19
seq1128 89.7 5e-13
>seq291
Length=196152
Score = 187 bits (206), Expect = 2e-42
Identities = 933/1469 (64%), Gaps = 51/1469 (3%)
Strand=Plus/Minus
Query 153664 TGCTGCATTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAAT 153723
||| || ||| ||||| |||||| || |||| || || ||||| || ||||||||||
Sbjct 78056 TGCGGCCTTTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAAT 77997
Query 153724 ACATGCCGGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAA-TAACGCG 153782
||||||| || || | ||| ||||| || | || | ||| | | || |
Sbjct 77996 ACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTAC-CA 77938
Query 153783 AAACTGGGCTGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGA 153842
| |||||| || | | ||| |||||||| |||||||||||||| || || |||
Sbjct 77937 TAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGA 77878
Query 153843 TCGGCCGCCATGTCAATCAA-GTTTTTACTGCTCATTTCCCACACAGTTTTGTA--GACG 153899
|| || ||||| | ||| | ||||| || | || ||||| ||||||||||| ||
Sbjct 77877 TCTGCAGCCATTTTGATCGATGTTTTCACGGAA-ATCTCCCAAACAGTTTTGTATAGATC 77819
Query 153900 GCTTTAATGTCGTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCG-GCC--GCTATA 153956
|| | |||| | |||||| ||||| || || | || |||| | | | ||||
Sbjct 77818 GCGT--ATGTGCTGTGGTATGGATTCAATATTTTGTA---TGGATCCGCGACTGGTTATA 77764
Query 153957 ATGGAATTGCGCATGTGGTCGTCGTACA--AATTTAGTCGACATAAATCTTCAACCAAGT 154014
|| ||| ||| | || || ||| | | ||| || ||| | |||||
Sbjct 77763 ATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGT-TAGATCGCGTAACAAGT 77705
Query 154015 GCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGA 154074
| || || | |||||||| || || | | || || || ||| | |||| |||
Sbjct 77704 GATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAAGTGT 77645
Query 154075 ACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACG 154134
|||| || || || || |||||||| | ||||| ||||| | || || ||||| ||
Sbjct 77644 ACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCG 77585
Query 154135 CCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAAT 154194
| | || ||||||||| || | ||| |||| || | || || || | |||||
Sbjct 77584 CAAGCAGCAAAGAGTTGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAAT 77525
Query 154195 TCCACA----AGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250
|||| | ||||||| ||| | | ||||||||| || || | || |||| |||
Sbjct 77524 TCCAAAGATCAGTTGGT--GTTTTA--TCCCACATGTCATACTGTAGAATACCCTTACTA 77469
Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTT--GCCAAGTCGCAACTGG 154308
| || | |||| | || | || | |||||| || || ||||||||||
Sbjct 77468 ACGGGTGAACCTTTATACGTTTCATAGGTGCCAT--AGTTTTCAGCTAATTCGCAACTGG 77411
Query 154309 CTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGT 154368
|||| || || ||||||| | |||||| ||||| | || || |||| |
Sbjct 77410 CTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCAAACGGAATGCTTCTT 77351
Query 154369 CACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTC 154428
|||||||||| || | | || || | ||||| ||||| | ||||| ||||| | |
Sbjct 77350 CACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACCTTGTATGCCAATAC 77291
Query 154429 CAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAATAATTGATAT 154488
||| ||| | ||| | |||||||||| | || || || ||||||| ||| || |
Sbjct 77290 CAATGGGACGATGTCTGAAATTCGATTTCCTTGCCTCCGGCAAGGGATAATGATTAATGT 77231
Query 154489 CGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNnnnnnnnnNATGCG-ACAAAA 154547
| || |||||||| | | ||| |||
Sbjct 77230 CTATGATTTTATTCA-GATTACGTGTAACGGTCTTTGTGACTTCTTTGAGGCGCTTAAAG 77172
Query 154548 TCAAACACT---CCGCTTTTAATAAAACGATTTACACACACAGACGCCAAGTTGCAAACG 154604
||| || | || | | | ||| ||| | | || ||||||||||| ||
Sbjct 77171 TCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCGAAGCCAAGTTGCACACA 77112
Query 154605 GCAATTTCTTCAG--AACTACTGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAA 154662
|| | || || | || | |||| ||||||||| | || |||||||| || ||
Sbjct 77111 GCTACCTCATCGGGTGACGA--ATATTCCACAATTTCGGTACATAAATTACTACACTTAA 77054
Query 154663 TGGTGCCCAGGTTTTTCTGATT-CGATTT-GATGTTGCATGCGTCTTTGTACAAAATGTA 154720
| ||||| | || | ||||| | ||| || || || || ||||| ||||| |||||
Sbjct 77053 TTGTGCCAACATTCTGTTGATTACTCTTTCGA--TTACAAGCATCTTTATACAACATGTA 76996
Query 154721 CGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAAC---AGACTTCGCGCCTC 154777
|| ||||| || |||||||| | |||||||| ||| |||| |||||| | || |
Sbjct 76995 TGGTGTGCCGGTCTCCACTTGCGATTCAATAA---TGCTAAACCAAAGACTTTGTGCTTT 76939
Query 154778 AACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAAACTCTAA 154837
| || | | || ||| ||||||| || | ||||| ||||||
Sbjct 76938 TATTTTCTTATTGGCACGTCCTTCCTGTTCATATTTCAGATATAACTTTTCGAACTCTTC 76879
Query 154838 ACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCACATTTCGTT 154897
|| | || || ||||||||||| || |||||||| | ||||| ||| |
Sbjct 76878 ACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGACCAGTCTTCATC 76819
Query 154898 TTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGC 154957
|| ||| ||||||||||| | ||| || | ||| || || || |||||||| | ||
Sbjct 76818 GGCTTCTACACGTTTCATAAATAGATCAGGTATCCATAAGGCATAGAACAAATCTCTGGC 76759
Query 154958 CTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATATGTCGGCGTG 155017
| ||||| ||| ||||| || || | |||||| || | || || || ||
Sbjct 76758 GCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTCGAAAATATCAGCATG 76699
Query 155018 CCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTT---TCCTCCTTGATCCACGTG 155074
||| || || | || | ||| | |||||| ||||| || ||||||||||| |
Sbjct 76698 CCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTTGATCCACATA 76639
Query 155075 ACGCACACAATTATTGTACACGCGCAACA 155103
|| | ||||||| |||| |||||||
Sbjct 76638 GCGTGCTATATTATTGAACACTCGCAACA 76610
>seq2732
Length=47336
Score = 116 bits (128), Expect = 4e-21
Identities = 154/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| |||| ||| | || || ||||| ||||| || || || || | ||||| | ||
Sbjct 1620 AAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATC 1679
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| | ||||| |||||| |||| || ||||| || || || ||||||||||| || ||
Sbjct 1680 TTCCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATC 1739
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| ||||| ||| ||| || | ||||| | || || || | ||| | |||
Sbjct 1740 TTGAATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGT 1799
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| || || | ||||||||||| |||||||||
Sbjct 1800 CTTACCCGTAAGGGTTTTTACGAATATTTGCATT 1833
>seq749
Length=113903
Score = 109 bits (120), Expect = 5e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || | ||||| || || || || || ||||||||||| | | ||||| ||||
Sbjct 954 AAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTC 1013
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| || || || |||||| | || | || || || || || || ||||||||||| ||
Sbjct 1014 TTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTC 1073
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
||| | | || ||||| ||| || | ||||| | || || || | ||| | ||
Sbjct 1074 TTG-AATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGG 1132
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||||||| ||||| || || ||||| |||||||||||
Sbjct 1133 TCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATTTT 1169
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| ||||| ||||||||||| | | ||| || ||||||| | |||
Sbjct 508 TGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCTTCCAATTGC 567
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| ||||| | || | || || || || |||||||| || || || || || | ||||
Sbjct 568 TTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTGTCCTG-AATTTT 626
Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
|||||| || || | |||||| | || || || | ||| | || || || ||
Sbjct 627 TGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATTGTTTTACCCGT 686
Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443
||||||||| ||||| ||||||||
Sbjct 687 CAAAGTTTTAACGAAGATTTGCAT 710
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || || | || |||| ||| | || ||||| |||||||| || || || |
Sbjct 711 ACCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGA 770
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || || | ||| ||||| || |||| | || || || || || ||
Sbjct 771 CAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGG 830
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|||||||| || ||||| ||||| ||||| ||| ||| | ||||| | || |
Sbjct 831 GATTCCTTCCTTATCTTGAATTTTA-GCTTTGACATTCTCAATGGTATCGGAAGGCTCAA 889
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | ||| | ||| || || ||||||||||| |||||||| |||||
Sbjct 890 CCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 938
Score = 86.0 bits (94), Expect = 6e-12
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || |||||||| ||||||||||| | | ||| || |||| || | ||
Sbjct 52 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCCTCCAATTGT 111
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|||||||| | || | || ||||| || || ||||| ||||| || ||||| || ||
Sbjct 112 TTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTATCTTGGATCTTA 171
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| || ||| | ||||| | || || || | || | ||| ||||| ||
Sbjct 172 GCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATGGTTTTGCCAGTG 231
Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444
| || || ||||| |||||||||
Sbjct 232 AGGGTCTTCACGAAGATTTGCATT 255
>seq1128
Length=88325
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | |||||||| || || || ||||| || | | || || | ||
Sbjct 322 AGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCC 263
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| ||||||||||| | || | || || || || || || ||||| || || |||
Sbjct 262 TCAAGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCT 203
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||| ||||| ||| ||| | ||||| | || ||||| | || | ||
Sbjct 202 TGGA-TTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGT 144
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | ||| || ||||| ||||||||
Sbjct 143 TTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499445191902400
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