Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_011165.1 Length=64427 Score E Sequences producing significant alignments: (Bits) Value seq2983 114 5e-21 >seq2983 Length=44036 Score = 114 bits (126), Expect = 5e-21 Identities = 299/445 (67%), Gaps = 21/445 (5%) Strand=Plus/Plus Query 14354 ACCACGCCGTCCATCCCGACCCCCATCCAGTTCCTTCAGACCTGGTTGCCTGGGTTCGTG 14413 |||| ||||| ||| |||| || ||||||||| | ||| ||| | || || |||||| Sbjct 13962 ACCAACCCGTCTATCGCGACGCCGATCCAGTTCTTACAGGAATGGCTCCCGGGCTTCGTG 14021 Query 14414 AAGGTCATGACCGCCGCGCGGAAAATCGATGAGATCATCGGCATCGACACCGTTGGCTCC 14473 |||| |||| | || |||||||| | | ||||| | | ||| | || || Sbjct 14022 CGCTTCATTACCGGTGTACGTAAAATCGACGCCCTTGTCGGCCTGGCGACCATCGGATCG 14081 Query 14474 TGGGAAGACCAGGAAATCGTTCAGGGTATCGTTGA---GCCGGCCGGCACTGCGGTGGAA 14530 ||||||||| | ||| |||| |||||| | || || || |||| ||| || Sbjct 14082 TGGGAAGACGAAGAAGTCGTACAGGGTTCTATGGAACTGCTGGGCGGC---GCGCTGCCG 14138 Query 14531 TACGGTGACCACACCAACATCCCGCTGACCAGCTGGAACGCCAACTTCGAACGTCGCACC 14590 ||| || | ||| || |||||||||||||||||||| |||| ||| |||| || Sbjct 14139 TACTCCGATTATGGCAATATTCCGCTGACCAGCTGGAACGCTAACTATGAAGGTCGTACG 14198 Query 14591 ATCGTTCGTGGCGAGCTGGGTATGATGGTGGGCACCCTGGAAGAGGGTCGTGCCTCGGCC 14650 |||| || ||||||||| | | || || |||||||| | | || || || Sbjct 14199 GTCGTACGCTTCGAGCTGGGCTTTAACGTTGGTCTGCTGGAAGAAG--CCCGCACCGCCC 14256 Query 14651 ATCCG-GC-TGAA--CAGCG-CCGAAACCAAACGC-CAACAGGCGGCCATCGGTCTGGAA 14704 | || || | || | ||| |||| || ||| | | | | | | | |||||| Sbjct 14257 GTGCGCGCATCAATTCCGCGTCCGA---GAAGCGCGCGAGCGTCACTGAGCAG-CTGGAA 14312 Query 14705 ATCTTCCGCAACGCCATCGGCTTTTATGGCTGGCAGAGCGGCCTGGGCAACCGCACCTAT 14764 ||| ||| |||| |||||||||||||||| | | ||| |||||| || | | Sbjct 14313 ATCCGCCGTAACGAAATCGGCTTTTATGGCTTTAACAACGG---TACCAACCGTACGTTT 14369 Query 14765 GGTTTCCTGAACGATCCCAACCTGC 14789 || |||||||||||||| ||||||| Sbjct 14370 GGCTTCCTGAACGATCCAAACCTGC 14394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 205961344221280