Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq291 138 1e-27 seq609 134 1e-26 seq749 109 5e-19 seq2732 89.7 5e-13 >seq291 Length=196152 Score = 138 bits (152), Expect = 1e-27 Identities = 487/748 (65%), Gaps = 11/748 (1%) Strand=Plus/Minus Query 153020 CAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCT 153079 ||||| || || || |||||||| || |||| | ||| || | ||| | |||| Sbjct 77709 CAAGTGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTGGA 77650 Query 153080 AGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCAT 153139 |||| | |||||||| || || || ||||| | ||||| || || | || || ||||| Sbjct 77649 AGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCAT 77590 Query 153140 GTACGCCACCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCT 153198 | ||| | || |||||| || || | || || ||| | | || |||||||| | Sbjct 77589 GGGCGCAAGCAGCAAAGAGTTGCGGACACCATGTTGCTTTATTTTC-TCCTTCAATTCGG 77531 Query 153199 GCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGAC 153258 ||||| ||| || | | ||||| | ||||||||| ||||||| | || || Sbjct 77530 TCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTAGAATACCCTTAC 77471 Query 153259 TGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAG 153318 | |||| || | |||| ||| |||| | | || || | |||||| || | Sbjct 77470 TAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAGCTAATTCGCAACTGG 77411 Query 153319 CCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGG-CCGCTTCT 153377 | || | ||||||||||| || |||||| ||||| | ||| | ||||| |||||| Sbjct 77410 CTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCA-AACGGAATGCTTCT 77352 Query 153378 TCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACG 153437 || || ||||| || |||| || | || |||||||| | ||| || || || | Sbjct 77351 TCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACCTTGTATGCCAATA 77292 Query 153438 CCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGA 153497 || ||||| ||||| | || ||| || || | |||||| ||||| Sbjct 77291 CCAATGGGACGATGTCTGAAATTCGATTTCCTTGCCTCCGGCAAGGGATAATGATTAATG 77232 Query 153498 TCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAA 153557 || || ||||| || || || || || || || | | || || || || Sbjct 77231 TCTATGATTTTATTCAGATTACGTGTAACGGTCTTTGTGACTTCTTTGAGGCGCTTAAAG 77172 Query 153558 TCATAGGTCATTTCGTCGACGCGT-ACGCATCGATTCACGGCAATAGACGCCAGATTACA 153616 ||||| || |||| ||| | || || | ||||| ||| || || |||| || || Sbjct 77171 TCATACGT--TTTC-TCG-GGTGTGACAAACATATTCAAGGCGATCGAAGCCAAGTTGCA 77116 Query 153617 GACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATT 153675 || || ||| || || | || || | ||| || |||| || | || || || | Sbjct 77115 CACAGCTACCTCATCGGGTGACG-AATATTCCACAATTTCGGTACATAAATTACTACACT 77057 Query 153676 TTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGT 153735 | || ||| | ||| || ||||| || || ||||| || || ||||| | | ||||| Sbjct 77056 TAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTATACAACATGT 76997 Query 153736 ACGGTCCGCCGGTCTCGACTTGCGTTTC 153763 | ||| ||||||||| ||||||| ||| Sbjct 76996 ATGGTGTGCCGGTCTCCACTTGCGATTC 76969 >seq609 Length=128410 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| ||| ||||| | | ||||||||||||| |||||||||||| | Sbjct 92970 CCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGAC 92911 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | |||||| |||| |||| | ||||||||| || || || Sbjct 92910 AAGGTACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGG 92851 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| |||||||| |||||| ||| | | ||| | |||||| | | ||| ||| Sbjct 92850 ATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACC 92791 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| | ||||| || ||||||||||| Sbjct 92790 TCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744 >seq749 Length=113903 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| ||||| | | |||||||| || |||||||| ||| Sbjct 939 GCCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGA 998 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||| || ||||||||||||| | |||||| ||| ||||| || || || Sbjct 999 CAGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGG 1058 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| | || | ||||| | ||| | || |||| | || | Sbjct 1059 GATTCCTTCTTTGTC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAA 1117 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||||| || || || || || ||||| Sbjct 1118 CCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 1166 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || || || | ||||||||||| | || ||||||||||| || |||||| | Sbjct 712 CCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGAC 771 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| | ||||| || | | || | ||| ||||| || || || Sbjct 772 AGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGG 831 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| |||| | ||| | | || | ||| |||| | ||| || Sbjct 832 ATTCCTTCCTTATC-TTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAAC 890 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | ||||| || |||| |||||| || |||||||||||| Sbjct 891 CTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 939 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | |||||||| || |||||||||||| | Sbjct 256 CCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 315 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| | ||| ||||||| |||| | ||| ||||| || ||||| Sbjct 316 AATGTGCGTCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGA 375 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || || || ||| || |||| | || | ||| || | | ||| || Sbjct 376 ATACCCTCCTTATCTTGGATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAACT 435 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || || || || ||||| || || ||||| Sbjct 436 TCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482 >seq2732 Length=47336 Score = 89.7 bits (98), Expect = 5e-13 Identities = 161/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| | ||| | |||||||| | | ||||| || ||||| || ||||| Sbjct 1605 GCCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGC 1664 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || || || | ||| || |||| | | |||||||||||||| || || || Sbjct 1665 CAATGTGCGACCATCTTCCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGG 1724 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| || || ||| |||| | |||| ||||| | || || | | ||| | Sbjct 1725 AATTCCTTCCTTATC-TTGAATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAA 1783 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 |||| | || | || ||||| || || |||||||| || || ||||| ||| Sbjct 1784 CCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAATATTTGCATTGCT 1836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496064143171200