Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq4050 91.5 1e-13 seq157 87.8 1e-12 >seq4050 Length=33668 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 69589 AGACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGT 69648 |||| ||||| || ||||| ||||| || |||||||| |||| || || || || Sbjct 7788 AGACAATTTACTCAAGAGTTGCTCGCGTATGCAAAAACGATCGTGGGGGTCCGTATTCAC 7729 Query 69649 ACTCGGATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAAT 69708 ||| | | ||||| |||||||| || | ||||||||||| || || |||||||||| Sbjct 7728 TCTCCAAAAGTTGGACTTCATTTTTGAAAGCGCGACTAAATTGCTCTGTACCCGGCGAAT 7669 Query 69709 TCCCCTTTTACTTTGACGAA 69728 | || || ||||| || ||| Sbjct 7668 TTCCTTTCTACTTCGATGAA 7649 >seq157 Length=290505 Score = 87.8 bits (96), Expect = 1e-12 Identities = 202/302 (67%), Gaps = 12/302 (4%) Strand=Plus/Minus Query 7474 GGCAATGTTAAACGGTACTCCAAGCATTAGGTCCGCACTGCGTTGATATAATTGTGCCGA 7533 |||||| ||||| ||||| || | | || ||||||||||| |||||||| || Sbjct 144942 GGCAATATTAAATGGTACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGA 144883 Query 7534 TAATTCTCCATTTACAGTATTCACGTGAAATTGTACGAGAATGTGACATGGAGGAAGAGC 7593 |||||||||||| || || ||||||| | ||| ||||| || || ||||| Sbjct 144882 TAATTCTCCATTGGCA------ACAAAAAATTGTGCAAGACAATGACAAGGTGGTAGAGC 144829 Query 7594 CATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATAATGCGACGACTTGTAGGGTC 7653 ||||| | || || |||||||| || ||||||||| || ||| | || | Sbjct 144828 CATTTGAGGGATATCGACAGGATTCCAAGCAGACATTATAATACGCCGATCATTTGGATT 144769 Query 7654 CTCTTTGATGGTGCGAATCACTTGTTGCAATTGGTC--GACCCCTTTATTCGT-ATAGTC 7710 | | |||| ||| ||| ||||| || | ||| || |||| | || || | ||| Sbjct 144768 GTTTCTGATTGTGTCAATTACTTGCTGAAGTTGATCTATACCCTCATCTTTGTAACTGTC 144709 Query 7711 CGTGTTACAATCAACGTACGATGCGCCAAAATGCCTCCATTGAAAACCGTAAATCGGACC 7770 | || || | |||| || |||||||| | ||| |||||||| |||| || || Sbjct 144708 C---TTGCAGTTTCTGTACTTGGCCCCAAAATGACGCCACTGAAAACCATAAACTGGGCC 144652 Query 7771 TA 7772 || Sbjct 144651 TA 144650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408084184170560