Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_011756.1 Length=66390 Score E Sequences producing significant alignments: (Bits) Value seq2983 116 2e-21 >seq2983 Length=44036 Score = 116 bits (128), Expect = 2e-21 Identities = 197/284 (69%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 15650 ACCACGCCGTCCATCCCGACTCCCATCCAGTTCCTGCAGACCTGGTTGCCAGGCTTCGTG 15709 |||| ||||| ||| |||| || ||||||||| | ||| ||| | || ||||||||| Sbjct 13962 ACCAACCCGTCTATCGCGACGCCGATCCAGTTCTTACAGGAATGGCTCCCGGGCTTCGTG 14021 Query 15710 AAGGTCACGACCGCTGCACGGAAGATCGACGAAATCATCGGCATCGATACCGTTGGCTCC 15769 ||| |||| || ||| || ||||||| | ||||| | | ||| | || || Sbjct 14022 CGCTTCATTACCGGTGTACGTAAAATCGACGCCCTTGTCGGCCTGGCGACCATCGGATCG 14081 Query 15770 TGGGAAGATCAAGAAATCGTCCAGGGCATCGTGGA---GCCGGCCGGCACTGCGGTGGAA 15826 |||||||| ||||| |||| ||||| |||| || || |||| ||| || Sbjct 14082 TGGGAAGACGAAGAAGTCGTACAGGGTTCTATGGAACTGCTGGGCGGC---GCGCTGCCG 14138 Query 15827 TACGGCGACCACACAAACATCCCGCTGACCAGCTGGAACGCCAACTTCGAACGCCGCACC 15886 ||| ||| | || || |||||||||||||||||||| |||| ||| | || || Sbjct 14139 TACTCCGATTATGGCAATATTCCGCTGACCAGCTGGAACGCTAACTATGAAGGTCGTACG 14198 Query 15887 ATCGTTCGTGGCGAGCTGGGCATGATGGTTGGTACCCTGGAAGA 15930 |||| || |||||||||| | | |||||| |||||||| Sbjct 14199 GTCGTACGCTTCGAGCTGGGCTTTAACGTTGGTCTGCTGGAAGA 14242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 212240497459560