Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_011810.1 Length=65764 Score E Sequences producing significant alignments: (Bits) Value seq2983 100 1e-16 >seq2983 Length=44036 Score = 100 bits (110), Expect = 1e-16 Identities = 295/446 (66%), Gaps = 23/446 (5%) Strand=Plus/Plus Query 15430 ACCACGCCGTCCATCCCGACCCCCATCCAGTTCCTTCAGACCTGGTTGCCTGGGTTCGTG 15489 |||| ||||| ||| |||| || ||||||||| | ||| ||| | || || |||||| Sbjct 13962 ACCAACCCGTCTATCGCGACGCCGATCCAGTTCTTACAGGAATGGCTCCCGGGCTTCGTG 14021 Query 15490 AAGGTCATGACCGCCGCGCGGAAAATCGATGAGATCATCGGCATCGACACCGTTGGCTCC 15549 |||| |||| | || |||||||| | | ||||| | | ||| | || || Sbjct 14022 CGCTTCATTACCGGTGTACGTAAAATCGACGCCCTTGTCGGCCTGGCGACCATCGGATCG 14081 Query 15550 TGGGAAGACCAGGAAATCGTTCAGGGTATCGTTGA---GCCGGCCGGCACTGCGGTGGAA 15606 ||||||||| | ||| |||| |||||| | || || || |||| ||| || Sbjct 14082 TGGGAAGACGAAGAAGTCGTACAGGGTTCTATGGAACTGCTGGGCGGC---GCGCTGCCG 14138 Query 15607 TACGGTGACCACACCAACATCCCGCTGACCAGCTGGAACGCCAACTTCGAGCGCCGCACC 15666 ||| || | ||| || |||||||||||||||||||| |||| || | || || Sbjct 14139 TACTCCGATTATGGCAATATTCCGCTGACCAGCTGGAACGCTAACTATGAAGGTCGTACG 14198 Query 15667 ATCGTTCGTGGTGAGCTGGGTCTGCTCGTGGGTACTCTGGAAGAGGGCCGCGCTTCGGCC 15726 |||| || |||||||| | ||| ||| |||||||| | |||| | || || Sbjct 14199 GTCGTACGCTTCGAGCTGGGCTTTAACGTTGGTCTGCTGGAAGAAGCCCGCAC--CGCCC 14256 Query 15727 AT--TCGCCTGAA--CAGCG-CAGAGGCCAAGCGTCAGCAGGCGGCCATCGG--TCTGGA 15779 | ||| | || | ||| | ||| ||||| || ||| | | | ||||| Sbjct 14257 GTGCGCGCATCAATTCCGCGTCCGAG---AAGCG--CGCGAGCGTCACTGAGCAGCTGGA 14311 Query 15780 AATCTTCCGCAACGCCATCGGTTTTTACGGCTGGCAGAGCGGCCTGGGCAACCGCACCTA 15839 |||| ||| |||| ||||| ||||| |||| | | ||| |||||| || | Sbjct 14312 AATCCGCCGTAACGAAATCGGCTTTTATGGCTTTAACAACGG---TACCAACCGTACGTT 14368 Query 15840 TGGTTTCCTGAATGACCCCAACCTGC 15865 ||| |||||||| || || ||||||| Sbjct 14369 TGGCTTCCTGAACGATCCAAACCTGC 14394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 210238077731000