Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq291 230 2e-55 seq749 127 2e-24 seq609 118 1e-21 seq1128 104 2e-17 seq2732 95.1 1e-14 >seq291 Length=196152 Score = 230 bits (254), Expect = 2e-55 Identities = 699/1071 (65%), Gaps = 33/1071 (3%) Strand=Plus/Plus Query 123279 GGCGGCAAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTAC 123338 ||||| ||||| |||||| | || ||||| || ||||| ||||| | |||| | | | Sbjct 76654 GGCGGTAAACGACCAGGCGCCTTTGCCATCTACCTGGAACCATGGCATGCTGATATTTTC 76713 Query 123339 GATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTG 123398 || ||||| | || ||| |||| || ||||| | ||| | |||||||| Sbjct 76714 GAATTTTTGGAATTGAAAAAAAACACTGGCAAAGAAGAGCATCGCGCCAGAGATTTGTTC 76773 Query 123399 TACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCG 123458 || || |||||| |||| ||| | |||||| ||| ||| ||| ||| | | |||||| Sbjct 76774 TATGCCTTATGGATACCTGATCTATTTATGAAACGTGTAGAAGCCGATGAAGACTGGTCG 76833 Query 123459 CTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAG 123518 || |||||||| | ||||||||| || || || | || | |||| || || Sbjct 76834 CTAATGTGTCCACACAAGTGTCCCGGTTTACATGAAGTATGGGGTGAAGAGTTCGAAAAG 76893 Query 123519 TTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGG---TTCCGGCAC---GT 123572 || || | |||| || | ||||| || | | | || | |||| || Sbjct 76894 TTATATCTGAAATATGAACAGGAAGG---ACGTGCCAATAAGAAAATAAAAGCACAAAGT 76950 Query 123573 GATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTAC 123632 || ||| | ||||| ||| | ||||| || ||||| || || |||||| | || Sbjct 76951 CTTTGGTTTAGCATTATT---GAATCGCAAGTGGAGACCGGCACACCATACATGTTGTAT 77007 Query 123633 AAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAAT 123692 ||||| || || || | || | ||||| || | || ||||| || ||||||||| Sbjct 77008 AAAGATGCTTGTAATCGAAAGAGTAATCAACAGAATGTTGGCACAATTAAGTGTAGTAAT 77067 Query 123693 CTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCT 123752 | || |||||||| | ||||| ||||| | || || ||||| || |||||| Sbjct 77068 TTATGTACCGAAATTGTGGAATATTCGTCACCCGATGAGGTAGCTGTGTGCAACTTGGCT 77127 Query 123753 TCGATTTGCGTGAATCGTTGCGTC--------GAAAACGGCGCTTTTAATTTCCAAACG- 123803 ||||| | ||||| | ||| ||||||| | | | ||| || || Sbjct 77128 TCGATCGCCTTGAATATGTTTGTCACACCCGAGAAAACG----TATGACTTT--AAGCGC 77181 Query 123804 CTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTT 123863 |||||| | ||||| || || | ||| |||| ||||| || || ||||| | Sbjct 77182 CTCAAAGAAGTCACAAAGACCGTTACACGTAATCTGAATAAAATCATAGACATTAATCAT 77241 Query 123864 TATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATT 123923 ||||| ||| ||| || | || ||||| | ||| | || | || | ||||| Sbjct 77242 TATCCCTTGCCGGAGGCAAGGAAATCGAATTTCAGACATCGTCCCATTGGTATTGGCATA 77301 Query 123924 CAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCA--A 123981 ||||| || |||||||| || | | |||| || |||||||| || |||||| Sbjct 77302 CAAGGTTTTGCCGACGCTTTAATTCTAATGCGTTACCCATACGAAAGTGAAGAAGCATTC 77361 Query 123982 AGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCG 124041 ||| | ||| ||||||| |||||| ||||| || ||||| ||||| || || |||| Sbjct 77362 CGTT--TGAATCAGCAAATATTCGAAACTATTTACTATGGCGCCTTGGAAGCCAGTTGCG 77419 Query 124042 AACTTGC-GAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGT 124100 || | || ||||| | | ||| | || |||| || || || | || ||| Sbjct 77420 AATTAGCTGAAAACT-ATGGCACCTATGAAACGTATAAAGGTTCACCCGTTAGTAAGGGT 77478 Query 124101 ATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTA 124160 ||| | ||||| ||||||||| || ||||| || || | ||| | |||| || || Sbjct 77479 ATTCTACAGTATGACATGTGGGATAAAACACCAACTGATCTTTGGAATTGGACCGAATTG 77538 Query 124161 AAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACG 124220 || | ||| | || ||| | || ||||| || || | ||| |||||| || Sbjct 77539 AAGGAGAAAATAAAGCAACATGGTGTCCGCAACTCTTTGCTGCTTGCGCCCATGCCAACT 77598 Query 124221 GCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTG 124280 || | || || |||||| | || ||||| || || || || |||| |||| |||| | Sbjct 77599 GCTTCAACAGCACAAATTATGGGCAACAATGAGTCATTTGAACCGTACACTTCCAATATT 77658 Query 124281 TACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCATTTG 124331 || || || ||| | | || || |||||||| |||||||||| ||| Sbjct 77659 TATACACGTCGTGTGCTTTCGGGTGAATTTCAAGTTGTAAATCATCACTTG 77709 >seq749 Length=113903 Score = 127 bits (140), Expect = 2e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 |||| ||| || || ||||||||||| |||||||| ||| ||| || | | ||| | Sbjct 730 ACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCG--GACAGTGTGCGTCCATCCT 787 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 |||| ||||| || ||| | ||||| ||||| || || || || || ||||| ||||||| Sbjct 788 CCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTT 847 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 ||||||| ||||| || | ||| ||||||| ||| || || | ||| | |||| Sbjct 848 GAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTT 907 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || | |||||| || ||||| ||||| Sbjct 908 TTCCCGTCAAAGTTTTGACGAAAATCTGCAT 938 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | ||| || | || || || |||||||||||||| || |||||| Sbjct 481 ATACCACCGCGGAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCG 540 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || |||||||| || || ||| | || || ||||| || || || Sbjct 541 GACAAGGTACGTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGA 600 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || || || || ||||||||| ||| | ||| | || ||||||| || Sbjct 601 GGAATACCCTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCA 660 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||||| ||||| || || | |||||| || || |||||||| Sbjct 661 ACCTCCAGAGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | ||| || | || || || || || |||||||| || |||||| Sbjct 25 ATACCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCG 84 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||||||||||| || ||| | ||||| |||||||| || || Sbjct 85 GACAAGGTACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGG 144 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| |||||||| | | || | | | || | || | ||| || |||| || Sbjct 145 GGAATGCCTTCCTTATCTTGGA-TCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTC 203 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| |||||||| || || || || || || |||||||| Sbjct 204 AACNTCCAAGGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254 Score = 105 bits (116), Expect = 6e-18 Identities = 166/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || ||||| | ||| || | || || || || ||||| ||||| || || ||| Sbjct 253 ATTCCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCG 312 Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | || |||||||| || || ||| | ||||| ||||| || || | Sbjct 313 --GACAATGTGCGTCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTG 370 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287 | ||||| || || |||||||| || || || | || | || | ||| || |||| | Sbjct 371 GAGGAATACCCTCCTTATCTTGGATCTTGGCCTTTA-CGTTCTCAATGGTATCTGAAGGC 429 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| | ||| | ||||||||||| || || ||||| || |||||||| Sbjct 430 TCAACTTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482 >seq609 Length=128410 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || || | ||| || ||||| ||||||||||| || || ||| Sbjct 92973 ATACCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCG 92914 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| |||||||||||||| ||| | ||||| || || || || || Sbjct 92913 GACAAGGTACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGG 92854 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || ||||| ||||| ||||| ||||| ||| | |||||| |||| |||| Sbjct 92853 GGGATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCG 92794 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || | || || || |||| ||||| || ||||| ||||| Sbjct 92793 ACCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744 >seq1128 Length=88325 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 |||||||| || | | ||| | ||| || || |||||||| || ||||| || ||| Sbjct 337 CCTCCGCGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGAC 278 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || ||| || | ||| || || ||| | ||||| ||||| || || || || Sbjct 277 AAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 218 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || |||||||| ||||| ||||| || | ||| || |||| ||| ||| Sbjct 217 ATTCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACT 158 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | || | ||||||||||| ||||| || || || |||||||| Sbjct 157 TCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 111 >seq2732 Length=47336 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||| ||||| || || || || || |||||||| || | || | ||| ||| Sbjct 1624 ACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCC 1683 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 ||||| ||||| || | || | || || || || |||||||| ||||| ||||||||| Sbjct 1684 AATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGA 1743 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| || | ||| | || || |||| ||| || || ||||| | || || Sbjct 1744 ATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTA 1803 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 || || || |||||||| || |||||||| || Sbjct 1804 CCCGTAAGGGTTTTTACGAATATTTGCATTGC 1835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451822624721600