Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq291 230 2e-55
seq749 127 2e-24
seq609 118 1e-21
seq1128 104 2e-17
seq2732 95.1 1e-14
>seq291
Length=196152
Score = 230 bits (254), Expect = 2e-55
Identities = 699/1071 (65%), Gaps = 33/1071 (3%)
Strand=Plus/Plus
Query 123279 GGCGGCAAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTAC 123338
||||| ||||| |||||| | || ||||| || ||||| ||||| | |||| | | |
Sbjct 76654 GGCGGTAAACGACCAGGCGCCTTTGCCATCTACCTGGAACCATGGCATGCTGATATTTTC 76713
Query 123339 GATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTG 123398
|| ||||| | || ||| |||| || ||||| | ||| | ||||||||
Sbjct 76714 GAATTTTTGGAATTGAAAAAAAACACTGGCAAAGAAGAGCATCGCGCCAGAGATTTGTTC 76773
Query 123399 TACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCG 123458
|| || |||||| |||| ||| | |||||| ||| ||| ||| ||| | | ||||||
Sbjct 76774 TATGCCTTATGGATACCTGATCTATTTATGAAACGTGTAGAAGCCGATGAAGACTGGTCG 76833
Query 123459 CTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAG 123518
|| |||||||| | ||||||||| || || || | || | |||| || ||
Sbjct 76834 CTAATGTGTCCACACAAGTGTCCCGGTTTACATGAAGTATGGGGTGAAGAGTTCGAAAAG 76893
Query 123519 TTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGG---TTCCGGCAC---GT 123572
|| || | |||| || | ||||| || | | | || | |||| ||
Sbjct 76894 TTATATCTGAAATATGAACAGGAAGG---ACGTGCCAATAAGAAAATAAAAGCACAAAGT 76950
Query 123573 GATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTAC 123632
|| ||| | ||||| ||| | ||||| || ||||| || || |||||| | ||
Sbjct 76951 CTTTGGTTTAGCATTATT---GAATCGCAAGTGGAGACCGGCACACCATACATGTTGTAT 77007
Query 123633 AAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAAT 123692
||||| || || || | || | ||||| || | || ||||| || |||||||||
Sbjct 77008 AAAGATGCTTGTAATCGAAAGAGTAATCAACAGAATGTTGGCACAATTAAGTGTAGTAAT 77067
Query 123693 CTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCT 123752
| || |||||||| | ||||| ||||| | || || ||||| || ||||||
Sbjct 77068 TTATGTACCGAAATTGTGGAATATTCGTCACCCGATGAGGTAGCTGTGTGCAACTTGGCT 77127
Query 123753 TCGATTTGCGTGAATCGTTGCGTC--------GAAAACGGCGCTTTTAATTTCCAAACG- 123803
||||| | ||||| | ||| ||||||| | | | ||| || ||
Sbjct 77128 TCGATCGCCTTGAATATGTTTGTCACACCCGAGAAAACG----TATGACTTT--AAGCGC 77181
Query 123804 CTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTT 123863
|||||| | ||||| || || | ||| |||| ||||| || || ||||| |
Sbjct 77182 CTCAAAGAAGTCACAAAGACCGTTACACGTAATCTGAATAAAATCATAGACATTAATCAT 77241
Query 123864 TATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATT 123923
||||| ||| ||| || | || ||||| | ||| | || | || | |||||
Sbjct 77242 TATCCCTTGCCGGAGGCAAGGAAATCGAATTTCAGACATCGTCCCATTGGTATTGGCATA 77301
Query 123924 CAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCA--A 123981
||||| || |||||||| || | | |||| || |||||||| || ||||||
Sbjct 77302 CAAGGTTTTGCCGACGCTTTAATTCTAATGCGTTACCCATACGAAAGTGAAGAAGCATTC 77361
Query 123982 AGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCG 124041
||| | ||| ||||||| |||||| ||||| || ||||| ||||| || || ||||
Sbjct 77362 CGTT--TGAATCAGCAAATATTCGAAACTATTTACTATGGCGCCTTGGAAGCCAGTTGCG 77419
Query 124042 AACTTGC-GAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGT 124100
|| | || ||||| | | ||| | || |||| || || || | || |||
Sbjct 77420 AATTAGCTGAAAACT-ATGGCACCTATGAAACGTATAAAGGTTCACCCGTTAGTAAGGGT 77478
Query 124101 ATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTA 124160
||| | ||||| ||||||||| || ||||| || || | ||| | |||| || ||
Sbjct 77479 ATTCTACAGTATGACATGTGGGATAAAACACCAACTGATCTTTGGAATTGGACCGAATTG 77538
Query 124161 AAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACG 124220
|| | ||| | || ||| | || ||||| || || | ||| |||||| ||
Sbjct 77539 AAGGAGAAAATAAAGCAACATGGTGTCCGCAACTCTTTGCTGCTTGCGCCCATGCCAACT 77598
Query 124221 GCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTG 124280
|| | || || |||||| | || ||||| || || || || |||| |||| |||| |
Sbjct 77599 GCTTCAACAGCACAAATTATGGGCAACAATGAGTCATTTGAACCGTACACTTCCAATATT 77658
Query 124281 TACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCATTTG 124331
|| || || ||| | | || || |||||||| |||||||||| |||
Sbjct 77659 TATACACGTCGTGTGCTTTCGGGTGAATTTCAAGTTGTAAATCATCACTTG 77709
>seq749
Length=113903
Score = 127 bits (140), Expect = 2e-24
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189
|||| ||| || || ||||||||||| |||||||| ||| ||| || | | ||| |
Sbjct 730 ACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCG--GACAGTGTGCGTCCATCCT 787
Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249
|||| ||||| || ||| | ||||| ||||| || || || || || ||||| |||||||
Sbjct 788 CCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTT 847
Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309
||||||| ||||| || | ||| ||||||| ||| || || | ||| | ||||
Sbjct 848 GAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTT 907
Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || | |||||| || ||||| |||||
Sbjct 908 TTCCCGTCAAAGTTTTGACGAAAATCTGCAT 938
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || |||||||| | ||| || | || || || |||||||||||||| || ||||||
Sbjct 481 ATACCACCGCGGAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCG 540
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || |||||||| || || ||| | || || ||||| || || ||
Sbjct 541 GACAAGGTACGTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGA 600
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || || || || ||||||||| ||| | ||| | || ||||||| ||
Sbjct 601 GGAATACCCTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCA 660
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||||| || || | |||||| || || ||||||||
Sbjct 661 ACCTCCAGAGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710
Score = 109 bits (120), Expect = 5e-19
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | ||| || | || || || || || |||||||| || ||||||
Sbjct 25 ATACCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCG 84
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || ||||||||||| || ||| | ||||| |||||||| || ||
Sbjct 85 GACAAGGTACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGG 144
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| |||||||| | | || | | | || | || | ||| || |||| ||
Sbjct 145 GGAATGCCTTCCTTATCTTGGA-TCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTC 203
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| |||||||| || || || || || || ||||||||
Sbjct 204 AACNTCCAAGGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254
Score = 105 bits (116), Expect = 6e-18
Identities = 166/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || ||||| | ||| || | || || || || ||||| ||||| || || |||
Sbjct 253 ATTCCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCG 312
Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| | | | || |||||||| || || ||| | ||||| ||||| || || |
Sbjct 313 --GACAATGTGCGTCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTG 370
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287
| ||||| || || |||||||| || || || | || | || | ||| || |||| |
Sbjct 371 GAGGAATACCCTCCTTATCTTGGATCTTGGCCTTTA-CGTTCTCAATGGTATCTGAAGGC 429
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| | ||| | ||||||||||| || || ||||| || ||||||||
Sbjct 430 TCAACTTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482
>seq609
Length=128410
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || | ||| || ||||| ||||||||||| || || |||
Sbjct 92973 ATACCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCG 92914
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| |||||||||||||| ||| | ||||| || || || || ||
Sbjct 92913 GACAAGGTACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGG 92854
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || || ||||| ||||| ||||| ||||| ||| | |||||| |||| ||||
Sbjct 92853 GGGATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCG 92794
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || | || || || |||| ||||| || ||||| |||||
Sbjct 92793 ACCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744
>seq1128
Length=88325
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|||||||| || | | ||| | ||| || || |||||||| || ||||| || |||
Sbjct 337 CCTCCGCGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGAC 278
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| || ||| || | ||| || || ||| | ||||| ||||| || || || ||
Sbjct 277 AAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 218
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| || || |||||||| ||||| ||||| || | ||| || |||| ||| |||
Sbjct 217 ATTCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACT 158
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| | || | ||||||||||| ||||| || || || ||||||||
Sbjct 157 TCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 111
>seq2732
Length=47336
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|||| ||||| || || || || || |||||||| || | || | ||| |||
Sbjct 1624 ACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCC 1683
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
||||| ||||| || | || | || || || || |||||||| ||||| |||||||||
Sbjct 1684 AATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGA 1743
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
||||| || | ||| | || || |||| ||| || || ||||| | || ||
Sbjct 1744 ATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTA 1803
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343
|| || || |||||||| || |||||||| ||
Sbjct 1804 CCCGTAAGGGTTTTTACGAATATTTGCATTGC 1835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451822624721600
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