Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2312 116 5e-21
>seq2312
Length=53118
Score = 116 bits (128), Expect = 5e-21
Identities = 247/363 (68%), Gaps = 8/363 (2%)
Strand=Plus/Plus
Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805
|||||||||||||||| || | || ||||| | ||||||||| | |||| |||||
Sbjct 32139 AACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTATAATTGGTATATACC 32198
Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865
| | |||||||||| | |||||||| | || | | || || || || |
Sbjct 32199 ACTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTTAACAACGGATCGTCGGCTG 32258
Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTT--GTGAAGATGTACCT--CGTTTGA 175921
| | || || || | || ||||| || ||||| || || | || | |
Sbjct 32259 GGTGGAATATGAGTCGCG--TCAAGGGTGACATTAAGGTGAAAATATAACGAGCGCTCGC 32316
Query 175922 GACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTG 175981
|| |||||| |||||| ||||| || ||||||||||||| ||||| | | |||
Sbjct 32317 -ACA-ATCTTTACCACCCTGCAGACGTGTACCAAATTGACCACGAGGCTCCAATAAATTA 32374
Query 175982 ATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACT 176041
||||| ||||| |||| || | | |||||| ||||| || ||| || || || |
Sbjct 32375 ATATTATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATC 32434
Query 176042 TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATC 176101
|| |||||||||||||| ||| | || |||||| | | | ||| ||||| || |||| |
Sbjct 32435 TCGCCGTGATGGTAGGCGGACATTTCAGCCACAGAACCAGACAATTGCGCAACTTTCACC 32494
Query 176102 TCA 176104
|||
Sbjct 32495 TCA 32497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613262103873600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |