Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq291 107 3e-18
>seq291
Length=196152
Score = 107 bits (118), Expect = 3e-18
Identities = 320/490 (65%), Gaps = 3/490 (1%)
Strand=Plus/Minus
Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899
|| ||||| || || || || || || | || || | | | || ||| ||||||||
Sbjct 78048 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 77989
Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959
||||| || || || ||| ||||| | || || |||| || || | ||||||
Sbjct 77988 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGGGC 77929
Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019
|| |||| ||| ||||| | ||||| || || |||||||| | | |||||||| |||
Sbjct 77928 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAGCC 77869
Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079
|| ||||| || ||| ||||||||||| || || ||| | | || | ||||
Sbjct 77868 ATTTTGATCGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 77809
Query 204080 TGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138
|| || | || | | | || || || ||| || || | | || || |
Sbjct 77808 TGTGGTATGGATT-CAATATTTTGTATGGATCCGCGACTGGTTATAATATTATTCTTCAT 77750
Query 204139 CTCCTCCCCCCACA-TGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCT 204197
|| || |||||| |||||| | | || || || | || ||| | || | | |
Sbjct 77749 ATCATCATCCCACAGNACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACTT 77690
Query 204198 GAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCT 204257
|||| || || || ||||| | || || | | ||| ||| | ||||| || | ||
Sbjct 77689 GAAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAAGTGTACGGTTCAAATGACT 77630
Query 204258 CGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGT 204317
| |||||||| | ||| || || || || || |||||||| || || |||| ||||
Sbjct 77629 CATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGT 77570
Query 204318 TGCGCACACC 204327
|||| |||||
Sbjct 77569 TGCGGACACC 77560
Score = 95.1 bits (104), Expect = 2e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899
|| ||||| || || || || || || | || || | | | || ||| ||||||||
Sbjct 85124 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 85065
Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959
||||| || || || ||| ||||| | || || |||| || || | ||||||
Sbjct 85064 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGGGC 85005
Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019
|| |||| ||| ||||| | ||||| || || |||||||| | | |||||||| |||
Sbjct 85004 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAGCC 84945
Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
|| ||||| || ||| ||||||||||| || || |||
Sbjct 84944 ATTTTGATCGATGTTTTCACGGAAATCTCCCAAACTGTTTTG 84903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794837535497600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |