Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq291 107 3e-18 >seq291 Length=196152 Score = 107 bits (118), Expect = 3e-18 Identities = 320/490 (65%), Gaps = 3/490 (1%) Strand=Plus/Minus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899 || ||||| || || || || || || | || || | | | || ||| |||||||| Sbjct 78048 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 77989 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 ||||| || || || ||| ||||| | || || |||| || || | |||||| Sbjct 77988 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGGGC 77929 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019 || |||| ||| ||||| | ||||| || || |||||||| | | |||||||| ||| Sbjct 77928 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAGCC 77869 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079 || ||||| || ||| ||||||||||| || || ||| | | || | |||| Sbjct 77868 ATTTTGATCGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 77809 Query 204080 TGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138 || || | || | | | || || || ||| || || | | || || | Sbjct 77808 TGTGGTATGGATT-CAATATTTTGTATGGATCCGCGACTGGTTATAATATTATTCTTCAT 77750 Query 204139 CTCCTCCCCCCACA-TGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCT 204197 || || |||||| |||||| | | || || || | || ||| | || | | | Sbjct 77749 ATCATCATCCCACAGNACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACTT 77690 Query 204198 GAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCT 204257 |||| || || || ||||| | || || | | ||| ||| | ||||| || | || Sbjct 77689 GAAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAAGTGTACGGTTCAAATGACT 77630 Query 204258 CGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGT 204317 | |||||||| | ||| || || || || || |||||||| || || |||| |||| Sbjct 77629 CATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGT 77570 Query 204318 TGCGCACACC 204327 |||| ||||| Sbjct 77569 TGCGGACACC 77560 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899 || ||||| || || || || || || | || || | | | || ||| |||||||| Sbjct 85124 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 85065 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 ||||| || || || ||| ||||| | || || |||| || || | |||||| Sbjct 85064 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGGGC 85005 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019 || |||| ||| ||||| | ||||| || || |||||||| | | |||||||| ||| Sbjct 85004 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAGCC 84945 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 || ||||| || ||| ||||||||||| || || ||| Sbjct 84944 ATTTTGATCGATGTTTTCACGGAAATCTCCCAAACTGTTTTG 84903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794837535497600