Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq225 172 5e-38
seq609 138 1e-27
seq1128 111 2e-19
seq749 111 2e-19
seq2732 93.3 4e-14
>seq225
Length=233467
Score = 172 bits (190), Expect = 5e-38
Identities = 371/553 (67%), Gaps = 4/553 (1%)
Strand=Plus/Minus
Query 132877 AAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGT 132936
||||| | ||||||||| || || ||||| ||||| | ||||| || | ||||| |||
Sbjct 26731 AAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGT 26672
Query 132937 TCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCG 132996
|| ||| || |||||||| ||||| | || ||||| || ||||| || || | ||
Sbjct 26671 TCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCA 26612
Query 132997 AAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAAC 133056
|||||||| ||||| | || || ||||| || || || | | || || || ||
Sbjct 26611 AAACTGCCACTGAAGAAAATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAG 26552
Query 133057 GTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC 133116
|||| || || ||||| |||||||| || ||||| || ||| |||
Sbjct 26551 TTGGCCGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGC 26492
Query 133117 ATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCT--TCCGAGGAACGCACGTAGGTGT 133174
|| || || || || || || || | | || || | | |||| | || || |
Sbjct 26491 ATTGTCTCTATAGCATTGAATAA--GTAATTCCTTTGTTTCGAGTCCTTAATATATGTAT 26434
Query 133175 CGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAA 133234
| || | | ||||||||| || || || |||||||| || |||||||| || || |
Sbjct 26433 CAATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGA 26374
Query 133235 AGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGA 133294
|||| || ||||| ||| || ||||| || ||| || || || | |||||| || |
Sbjct 26373 AGCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCA 26314
Query 133295 CGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGT 133354
| || || || |||||||||||||| | |||||| || ||||| || || || |
Sbjct 26313 CAATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTAT 26254
Query 133355 CGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAA 133414
| | | || |||| || | | || || || || || || ||| | || ||||| |
Sbjct 26253 CAGTTAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGA 26194
Query 133415 ACGACGCCTCGGC 133427
|||| || || ||
Sbjct 26193 ACGATGCTTCTGC 26181
>seq609
Length=128410
Score = 138 bits (152), Expect = 1e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| ||||| | || || || ||||||||| | || |||||| |
Sbjct 92741 AAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCCT 92800
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | ||| | |||| ||||||| ||||||||||| || ||| | ||
Sbjct 92801 TCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCAGAT 92860
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|||||||| | || | ||| || ||||| |||| || | || ||| | |||||||
Sbjct 92861 CAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGTACCTTGTCCGACTAC 92920
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||||||||| | || || |||||||| ||||||
Sbjct 92921 AACATCCAAAAGGAGTCAACCCTCCATTTGGTTCTGCGT 92959
>seq1128
Length=88325
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| |||||||| |||||| | || || ||| | |
Sbjct 111 ATGCAAATCTTCGTGAAGACTCTCACCGGCAAAACAATCACCTTGGAAGTTGAGCCTTCG 170
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | |||| ||||||| || || |||||||| || | || |||
Sbjct 171 GATACCATTGAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGAATCCCACCAGATCAA 230
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | || | ||| ||||| || || || || | || || | |||||||||
Sbjct 231 CAACGTTTGATCTTCGCCGGCAAGCAACTTGAGGATGGACGTACTTTGTCCGACTACAAT 290
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || |||||| |||| || ||||||||||| |||
Sbjct 291 ATACAGAAGGAATCGACACTCCATTTGGTGCTACGT 326
>seq749
Length=113903
Score = 111 bits (122), Expect = 2e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
||||||||||| ||||| || || | || ||||| |||||||| | || || || |
Sbjct 1169 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 1110
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||| | | ||| |||||| || || | |||||||| ||||| ||| | ||
Sbjct 1109 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 1050
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
||||| || | || | || || ||||| ||||| |||| ||||| || ||| |||
Sbjct 1049 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 990
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||| ||||| | || || |||||||| || |||
Sbjct 989 AACATCCAGAAGGAGTCTACACTTCATTTGGTTCTTCGT 951
Score = 109 bits (120), Expect = 5e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | ||||| ||||| || || | || || || | ||
Sbjct 710 ATGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCC 651
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | ||||| |||||| |||||| | ||||| ||||| ||||| | || ||
Sbjct 650 GATACAATTGAAAACG-TTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCA 592
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || || || |||| |||| || ||| | ||| |||||
Sbjct 591 ACAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAA 532
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||||| | || || || ||||| |||||
Sbjct 531 CATCCAAAAGGAATCTACTCTTCACTTGGTATTGCGT 495
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| | ||||| ||||||||||| | || || ||| | ||
Sbjct 938 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 879
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | |||| ||||| | || || || ||||| ||| | || |||
Sbjct 878 GATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 819
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | |||| ||| ||||||||| |||| || | ||||| || |||||| ||
Sbjct 818 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAAT 759
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
|| ||||||||| | || || ||||| || || || ||
Sbjct 758 ATTCAAAAGGAATCCACTCTACATTTAGTTCTACGCTT 721
Score = 105 bits (116), Expect = 7e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| |||||||| || ||||| |||||||||||||| | || || ||| | |
Sbjct 482 ATGCAAATCTTCGTAAAGACCCTCACCGGCAAAACCATCACTTTGGAAGTTGAGCCTTCA 423
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || | || |||| || || ||||| ||||| | || ||
Sbjct 422 GATACCATTGAGAACG-TAAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCAGATCA 364
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || || || |||| |||| ||||| | |||||||||
Sbjct 363 ACAACGTTTGATCTTCGCCGGTAAGCAATTGGAGGACGGACGCACATTGTCCGACTACAA 304
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || || ||||| |||||
Sbjct 303 CATCCAGAAGGAGTCTACTCTTCACTTGGTATTGCGT 267
Score = 104 bits (114), Expect = 2e-17
Identities = 155/218 (71%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| || || ||||| ||||||||||| ||| | || || || | |
Sbjct 255 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTC 196
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | | |||| |||| | || |||| || || || || |||||| | || |
Sbjct 195 AGATACCATTGAGAACG-TTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCAGATC 137
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || | || | ||| |||||||| |||| |||| || ||| | ||| ||||
Sbjct 136 AGCAACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACA 77
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||||| || | || || || ||||| |||||
Sbjct 76 ACATCCAAAAAGAGTCTACTCTTCACTTGGTATTGCGT 39
>seq2732
Length=47336
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||||||||||||||| || ||||| || |||||||| | || || ||| | |
Sbjct 1833 AATGCAAATATTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTC 1774
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | || |||| | ||||| | || || || |||||||| | || ||
Sbjct 1773 GGATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCGCCTGATCA 1714
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| || |||| || || || || |||| || | ||||| | ||||| ||
Sbjct 1713 ACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATAA 1654
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|| || || || | || ||||||| || || ||| | ||||| |||
Sbjct 1653 TATTCAGAAAGAGTCTACATTGCATTTAGTACTTCGTCTTAGAGGTGGC 1605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499972980966400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |