Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq2312 129 7e-25
seq291 111 2e-19
>seq2312
Length=53118
Score = 129 bits (142), Expect = 7e-25
Identities = 291/430 (68%), Gaps = 8/430 (2%)
Strand=Plus/Plus
Query 167357 AACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAA 167416
|||| || |||||||| |||| ||| || ||||||||||| |||| | |||| || ||
Sbjct 32139 AACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTATAATTGGTATATACC 32198
Query 167417 AGTCGGGTTCAATGGAACGACCATCATCATCCAAGTA-GTTGAGAATGGCATCATCTTTG 167475
| | |||||||| ||||||||||| | ||| ||| | || || ||| ||
Sbjct 32199 ACTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTTAACAACGG-ATCGTCGGCT 32257
Query 167476 GGATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTC--GTAAAGATGTACCTCGT-CTGA 167532
|| | ||| | ||| | || ||| | || || || || || | | ||
Sbjct 32258 GGGTGGAATATGAGTCGCG--TCAAGGGTGACATTAAGGTGAAAATATAACGAGCGCTCG 32315
Query 167533 GACGCATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTG 167592
|| ||| || |||||| || ||||||||||||||||||| ||||| | | |||
Sbjct 32316 CACA-ATCTTTACCACCCTGCAGACGTGTACCAAATTGACCACGAGGCTCCAATAAATTA 32374
Query 167593 ATGTTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGGAAACT 167652
|| ||||| || ||| |||| | ||||| ||||| || || | || || |
Sbjct 32375 ATATTATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATC 32434
Query 167653 TCGCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATC 167712
|||||||| ||||| || | ||||||||||| | | | ||| || ||||| |||| |
Sbjct 32435 TCGCCGTGATGGTAGGCGGACATTTCAGCCACAGAACCAGACAATTGCGCAACTTTCACC 32494
Query 167713 TCATCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGA 167772
||| |||| || || |||||| | | ||||||| |||||||| || || | |
Sbjct 32495 TCACGTTTGTCGTTACGTTTGAAACAGGTAAACATAACTTTGCGTTGGCCCGGCTTAAAA 32554
Query 167773 CCATCTGCCA 167782
|||||| |||
Sbjct 32555 CCATCTACCA 32564
>seq291
Length=196152
Score = 111 bits (122), Expect = 2e-19
Identities = 305/458 (67%), Gaps = 11/458 (2%)
Strand=Plus/Minus
Query 109402 TTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATT 109461
|||| || | ||||||||| || || |||||||| |||||||| |||| | ||| ||
Sbjct 78012 TTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATA 77953
Query 109462 GAAGAGAGTTTGGAAAGTGTCGGACTCT-CCATAAACAAGTTCATCGACTGAGACTGATC 109520
|||| ||| || | || || ||| ||| | ||| | ||||||| ||||||
Sbjct 77952 GAAGTGAGCTTACCATA-GTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTCTGATC 77894
Query 109521 GATGAATCGACCACGATCAGCCGCCATGTCGAT-GATACACTTTT--GGCTAATTTCCCA 109577
||||||| ||||||||| || ||||| | ||| ||| |||| | ||| |||||
Sbjct 77893 GATGAATGCACCACGATCTGCAGCCATTTTGATCGAT---GTTTTCACGGAAATCTCCCA 77837
Query 109578 GACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCC 109637
||||| ||||| | || || | | || ||| | || ||||| || || ||
Sbjct 77836 AACAGTTTTGTATAGATCGCGTATGTGCTGTGGTATGGATTCAATATTTTGTATGGATCC 77777
Query 109638 ACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG-ACCGACCTTTTTGAGAT 109696
| | | | || || |||||| || | ||| || ||| | || | ||||
Sbjct 77776 GCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTTAGAT 77717
Query 109697 CG-TCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAG 109755
|| |||||| || | || || || ||||||||| | ||| || || ||
Sbjct 77716 CGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATAA 77658
Query 109756 ATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCT 109815
|| || | ||||| ||||| || ||||||||||||| | |||||||| || |||||
Sbjct 77657 ATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCA 77598
Query 109816 GTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853
|| |||||||| || | || | | ||| |||| |||
Sbjct 77597 GTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACC 77560
Score = 86.0 bits (94), Expect = 7e-12
Identities = 287/437 (66%), Gaps = 11/437 (3%)
Strand=Plus/Minus
Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTA 110757
|||||||| || | ||||| | ||||||||||| || |||| || | || ||
Sbjct 76724 TCCAAAAATTCGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGT 76665
Query 110758 CGACGACC--CGCCTGGTTA-ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814
|| ||| | ||| | | |||||||||||| | |||||| || | | ||||||
Sbjct 76664 CGTTTACCGCCACCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGC 76605
Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATT-CTGGACTTATTGGCACGAATGTC 110873
| | |||| ||| | |||||||||| |||| | | | | ||| |||| |||
Sbjct 76604 ACCAAACCATTTGATGTGCTATTTGTACCCACAATTGCAGTGCCTTTTG-CACGTATGCA 76546
Query 110874 GTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTC-TGTG-AG- 110930
|| | | || ||||||||| || || | || ||| |||||| | |||| ||
Sbjct 76545 ATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGA 76486
Query 110931 TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACAT 110990
||| ||||||||||||| ||||| || ||| | ||||||||| || ||||
Sbjct 76485 TGTGA---AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAA 76429
Query 110991 CTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG 111050
|| || | || | ||| ||| || || || | ||||| | || || ||
Sbjct 76428 TTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTC 76369
Query 111051 GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGC 111110
||| | | |||||| || |||| ||| | | |||| || || ||||| |||||
Sbjct 76368 GGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGC 76309
Query 111111 AACTCGCATGAACATAT 111127
||| ||||| |||||||
Sbjct 76308 AACACGCATTAACATAT 76292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588740704088000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |