Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2312 129 7e-25 seq291 111 2e-19 >seq2312 Length=53118 Score = 129 bits (142), Expect = 7e-25 Identities = 291/430 (68%), Gaps = 8/430 (2%) Strand=Plus/Plus Query 167357 AACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAA 167416 |||| || |||||||| |||| ||| || ||||||||||| |||| | |||| || || Sbjct 32139 AACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTATAATTGGTATATACC 32198 Query 167417 AGTCGGGTTCAATGGAACGACCATCATCATCCAAGTA-GTTGAGAATGGCATCATCTTTG 167475 | | |||||||| ||||||||||| | ||| ||| | || || ||| || Sbjct 32199 ACTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTTAACAACGG-ATCGTCGGCT 32257 Query 167476 GGATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTC--GTAAAGATGTACCTCGT-CTGA 167532 || | ||| | ||| | || ||| | || || || || || | | || Sbjct 32258 GGGTGGAATATGAGTCGCG--TCAAGGGTGACATTAAGGTGAAAATATAACGAGCGCTCG 32315 Query 167533 GACGCATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTG 167592 || ||| || |||||| || ||||||||||||||||||| ||||| | | ||| Sbjct 32316 CACA-ATCTTTACCACCCTGCAGACGTGTACCAAATTGACCACGAGGCTCCAATAAATTA 32374 Query 167593 ATGTTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGGAAACT 167652 || ||||| || ||| |||| | ||||| ||||| || || | || || | Sbjct 32375 ATATTATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATC 32434 Query 167653 TCGCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATC 167712 |||||||| ||||| || | ||||||||||| | | | ||| || ||||| |||| | Sbjct 32435 TCGCCGTGATGGTAGGCGGACATTTCAGCCACAGAACCAGACAATTGCGCAACTTTCACC 32494 Query 167713 TCATCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGA 167772 ||| |||| || || |||||| | | ||||||| |||||||| || || | | Sbjct 32495 TCACGTTTGTCGTTACGTTTGAAACAGGTAAACATAACTTTGCGTTGGCCCGGCTTAAAA 32554 Query 167773 CCATCTGCCA 167782 |||||| ||| Sbjct 32555 CCATCTACCA 32564 >seq291 Length=196152 Score = 111 bits (122), Expect = 2e-19 Identities = 305/458 (67%), Gaps = 11/458 (2%) Strand=Plus/Minus Query 109402 TTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATT 109461 |||| || | ||||||||| || || |||||||| |||||||| |||| | ||| || Sbjct 78012 TTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATA 77953 Query 109462 GAAGAGAGTTTGGAAAGTGTCGGACTCT-CCATAAACAAGTTCATCGACTGAGACTGATC 109520 |||| ||| || | || || ||| ||| | ||| | ||||||| |||||| Sbjct 77952 GAAGTGAGCTTACCATA-GTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTCTGATC 77894 Query 109521 GATGAATCGACCACGATCAGCCGCCATGTCGAT-GATACACTTTT--GGCTAATTTCCCA 109577 ||||||| ||||||||| || ||||| | ||| ||| |||| | ||| ||||| Sbjct 77893 GATGAATGCACCACGATCTGCAGCCATTTTGATCGAT---GTTTTCACGGAAATCTCCCA 77837 Query 109578 GACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCC 109637 ||||| ||||| | || || | | || ||| | || ||||| || || || Sbjct 77836 AACAGTTTTGTATAGATCGCGTATGTGCTGTGGTATGGATTCAATATTTTGTATGGATCC 77777 Query 109638 ACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG-ACCGACCTTTTTGAGAT 109696 | | | | || || |||||| || | ||| || ||| | || | |||| Sbjct 77776 GCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTTAGAT 77717 Query 109697 CG-TCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAG 109755 || |||||| || | || || || ||||||||| | ||| || || || Sbjct 77716 CGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATAA 77658 Query 109756 ATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCT 109815 || || | ||||| ||||| || ||||||||||||| | |||||||| || ||||| Sbjct 77657 ATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCA 77598 Query 109816 GTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 || |||||||| || | || | | ||| |||| ||| Sbjct 77597 GTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACC 77560 Score = 86.0 bits (94), Expect = 7e-12 Identities = 287/437 (66%), Gaps = 11/437 (3%) Strand=Plus/Minus Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTA 110757 |||||||| || | ||||| | ||||||||||| || |||| || | || || Sbjct 76724 TCCAAAAATTCGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGT 76665 Query 110758 CGACGACC--CGCCTGGTTA-ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 || ||| | ||| | | |||||||||||| | |||||| || | | |||||| Sbjct 76664 CGTTTACCGCCACCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGC 76605 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATT-CTGGACTTATTGGCACGAATGTC 110873 | | |||| ||| | |||||||||| |||| | | | | ||| |||| ||| Sbjct 76604 ACCAAACCATTTGATGTGCTATTTGTACCCACAATTGCAGTGCCTTTTG-CACGTATGCA 76546 Query 110874 GTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTC-TGTG-AG- 110930 || | | || ||||||||| || || | || ||| |||||| | |||| || Sbjct 76545 ATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGA 76486 Query 110931 TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACAT 110990 ||| ||||||||||||| ||||| || ||| | ||||||||| || |||| Sbjct 76485 TGTGA---AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAA 76429 Query 110991 CTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG 111050 || || | || | ||| ||| || || || | ||||| | || || || Sbjct 76428 TTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTC 76369 Query 111051 GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGC 111110 ||| | | |||||| || |||| ||| | | |||| || || ||||| ||||| Sbjct 76368 GGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGC 76309 Query 111111 AACTCGCATGAACATAT 111127 ||| ||||| ||||||| Sbjct 76308 AACACGCATTAACATAT 76292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588740704088000