Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq709 87.8 2e-12 >seq709 Length=118196 Score = 87.8 bits (96), Expect = 2e-12 Identities = 167/244 (68%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923 |||| ||| | ||||| || || ||||| ||| ||||||||||| | || | Sbjct 50468 TGTCCTGTCTGATGATCACCTATCCATCCACAATGGGTGTATTTGAGGAGACTGTTG--C 50525 Query 154924 AGATATGTAAGATCG--TTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCT 154981 ||||| | |||| | ||| | |||| || |||||||| | || || || ||| | Sbjct 50526 TGATATATGCGATCTGATCCATAAACATGGCGGACAGGTATACTTGGACGGCGCTAATAT 50585 Query 154982 AAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAA 155041 ||||||||||| || ||| || | || ||||| ||||| | |||| | || Sbjct 50586 GAATGCACAGGTGGGTCTATGTCGTCCCGGCGATTATGGCAGTGATGTCTCTCATTTGAA 50645 Query 155042 CTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGG 155101 |||| || || ||||| || |||||||| ||||| || ||||| | ||||| || || Sbjct 50646 TCTACACAAGACTTTCTGCATACCACATGGTGGTGGCGGCCCTGGTATGGGTCCGATTGG 50705 Query 155102 TGTA 155105 ||| Sbjct 50706 CGTA 50709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578981404486400