Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq709 105 8e-18 >seq709 Length=118196 Score = 105 bits (116), Expect = 8e-18 Identities = 173/244 (71%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 159539 TGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGAC 159598 |||| ||| | ||||| || |||||||| ||| ||||||||||| | || | | Sbjct 50468 TGTCCTGTCTGATGATCACCTATCCATCCACAATGGGTGTATTTGAGG-AGACTGTTG-C 50525 Query 159599 AGATATGTAAGAT-TGTTC-ATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCT 159656 ||||| | ||| || || || | |||| || |||||||| | || || || ||| | Sbjct 50526 TGATATATGCGATCTGATCCATAAACATGGCGGACAGGTATACTTGGACGGCGCTAATAT 50585 Query 159657 AAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAA 159716 ||||||||||| |||||| || | || ||||| ||||| | |||| | || Sbjct 50586 GAATGCACAGGTGGGTCTATGTCGTCCCGGCGATTATGGCAGTGATGTCTCTCATTTGAA 50645 Query 159717 CTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGG 159776 |||| ||||| ||||| || |||||||| ||||| || ||||| | ||||| ||||| Sbjct 50646 TCTACACAAGACTTTCTGCATACCACATGGTGGTGGCGGCCCTGGTATGGGTCCGATTGG 50705 Query 159777 TGTA 159780 ||| Sbjct 50706 CGTA 50709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587816273545600