Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq749 165 2e-35 seq2732 123 6e-23 seq1128 123 6e-23 seq609 122 2e-22 >seq749 Length=113903 Score = 165 bits (182), Expect = 2e-35 Identities = 170/220 (77%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTC 194980 ||| | ||| || | ||||||||| || || ||||| || |||||||||| |||| || | Sbjct 492 GAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAG-GTAC 550 Query 194981 TCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTT 195040 || ||||| | |||||||| |||||||| | |||||||| ||||||||||| || | Sbjct 551 GTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCT 610 Query 195041 CTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGG 195100 | ||||| ||||||||| || ||||| ||||| || || ||| ||| || || || | Sbjct 611 CCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAG 670 Query 195101 TAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || || ||||||||||| ||||| | |||||| Sbjct 671 TAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710 Score = 145 bits (160), Expect = 2e-29 Identities = 166/221 (75%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTC 194980 ||| | ||| || | ||||||||| ||||||||||| || |||||||||| |||| || | Sbjct 36 GAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAG-GTAC 94 Query 194981 TCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTT 195040 || || || | || || || |||||||| | ||||| || ||||| |||||||||| Sbjct 95 GTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTT 154 Query 195041 CTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGG 195100 | || ||||| || || ||| |||||||||||||| || ||| ||| || || | || Sbjct 155 CCTTATCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGG 214 Query 195101 TAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| || || || || | || || ||||| | ||||||| Sbjct 215 TAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCATT 255 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || |||||||| || ||||||||||| || |||| || || | ||||| || | ||| Sbjct 736 TGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCATCCTCCAACTGT 795 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || | |||||||| ||||| || || ||||| || ||||||||||| Sbjct 796 TTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAATTTTA 855 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||| ||||||||||| || ||| || || || | || | || ||||| ||| Sbjct 856 GCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCGTC 915 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 |||||||| ||||| | ||||| Sbjct 916 AAAGTTTTGACGAAAATCTGCAT 938 Score = 136 bits (150), Expect = 9e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || ||||| || || || |||||||||| ||||| | || ||||| || || Sbjct 964 TGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCCAGTTGT 1023 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| | |||||||| ||||| || || ||||||||||||||||| || Sbjct 1024 TTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGAATCTTA 1083 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || ||||| || || || ||| || || || || | ||||| || ||| Sbjct 1084 GCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTGCCAGTC 1143 Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142 || || || ||||| | |||||||| Sbjct 1144 AAGGTCTTCACGAAGATTTGCATTT 1168 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | ||| || | ||||||||| ||||| || || || ||||| |||| | || | Sbjct 264 GAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCG 323 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || || || | |||||||| |||||||| | |||||||| ||||||||||| || || Sbjct 324 TCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGAATACCCTC 383 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || ||||| || || ||| |||||||||||||| || ||| || ||||| | || Sbjct 384 CTTATCTTGGATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAAAGT 443 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | || |||||||| | |||||| Sbjct 444 GATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482 >seq2732 Length=47336 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || |||||||| |||||||| || || || | || | |||||||| | ||||| || Sbjct 1636 GTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCCAATTGCTTTCCG 1695 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || || || || || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct 1696 GCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGAATTTTGGCCTTA 1755 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || | ||||| || |||||| || || ||||| || | ||||| || || | ||| Sbjct 1756 ACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGGTT 1815 Query 195124 TTTACGAACACTTGCATT 195141 |||||||| | ||||||| Sbjct 1816 TTTACGAATATTTGCATT 1833 >seq1128 Length=88325 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || || || || || |||||||| |||| | ||| | ||||| || || ||| Sbjct 313 TGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCAAGTTGC 254 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | |||||||| ||||| || || || || || ||||| ||||| Sbjct 253 TTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGGATTTTG 194 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||| ||||||||||| |||||| || ||||| | ||| | || || || || Sbjct 193 GCTTTGACATTCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTTTGCCGGTG 134 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | |||||| Sbjct 133 AGAGTCTTCACGAAGATTTGCAT 111 >seq609 Length=128410 Score = 122 bits (134), Expect = 2e-22 Identities = 152/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 || || || ||||| ||||| || ||||| |||| |||| || | |||||||| | || Sbjct 92946 TGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAG-GTACGACCATCTTCCAATTG 92888 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || |||||||| | || ||||| ||||| || || || ||||||||||| ||||| Sbjct 92887 TTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGGATTTT 92828 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || || |||||||| ||| || || || | ||| | ||||| || || Sbjct 92827 AGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTACCAGT 92768 Query 195117 CAAAGTTTTTACGAACACTTGCATTT 195142 || ||||| ||||| | ||||||| Sbjct 92767 TAAGGTTTTGACGAAAATCTGCATTT 92742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109027281153320