Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1128 84.2 1e-11 seq749 84.2 1e-11 >seq1128 Length=88325 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | ||| ||| ||||| || || ||||| || | | ||| |||| || Sbjct 319 ACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCA 260 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || || ||||| || || | ||||| || ||| | || | |||||||| || Sbjct 259 AGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGG 200 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | || | |||||| || | ||| || |||| Sbjct 199 ATTTTGGCTTTGAC--ATTCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTT 142 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || |||||||||||||| ||||| |||||| Sbjct 141 TGCCGGTGAGAGTCTTCACGAAGATTTGCATA 110 >seq749 Length=113903 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| || || | ||| ||| || ||||| |||||||| || || | ||| |||| || Sbjct 729 AACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCATCCTC 788 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||| || || || || | ||||| || ||| | || | || ||||| || Sbjct 789 CAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTG 848 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||| || |||||| || || || | || | |||||| || | || |||||| Sbjct 849 AATTTTAGCTTTGAC--ATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTT 906 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| | ||| || || || |||||||| Sbjct 907 TTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324507151154880