Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1128 84.2 1e-11
seq749 84.2 1e-11
>seq1128
Length=88325
Score = 84.2 bits (92), Expect = 1e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
||||| || | ||| ||| ||||| || || ||||| || | | ||| |||| ||
Sbjct 319 ACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCA 260
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|| || || ||||| || || | ||||| || ||| | || | |||||||| ||
Sbjct 259 AGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGG 200
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
|| || |||||| || || || | || | |||||| || | ||| || ||||
Sbjct 199 ATTTTGGCTTTGAC--ATTCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTT 142
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || |||||||||||||| ||||| ||||||
Sbjct 141 TGCCGGTGAGAGTCTTCACGAAGATTTGCATA 110
>seq749
Length=113903
Score = 84.2 bits (92), Expect = 1e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||| || || | ||| ||| || ||||| |||||||| || || | ||| |||| ||
Sbjct 729 AACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCATCCTC 788
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|| |||||| || || || || | ||||| || ||| | || | || ||||| ||
Sbjct 789 CAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTG 848
Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
||| || |||||| || || || | || | |||||| || | || ||||||
Sbjct 849 AATTTTAGCTTTGAC--ATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTT 906
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||||||| | ||| || || || ||||||||
Sbjct 907 TTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324507151154880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |