Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq291 343 2e-89
seq225 286 4e-72
>seq291
Length=196152
Score = 343 bits (380), Expect = 2e-89
Identities = 1209/1883 (64%), Gaps = 27/1883 (1%)
Strand=Plus/Minus
Query 46972 CTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATAC 47031
|||| ||||||||||| | || | ||| |||| ||| || || ||||||||||| |
Sbjct 78050 CTTTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGC 77991
Query 47032 CAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAG 47091
||||||| | |||| |||| || |||||||| ||| ||| | ||| ||| | |
Sbjct 77990 CAGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGG 77931
Query 47092 GTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTG 47151
| || | | || || || | || ||||||||||| || |||||||| | ||| || |
Sbjct 77930 GCTCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAG 77871
Query 47152 CCATATCTAAAATAACCCTTTGTGGTA-TCTCCCATACTGTTTTATAAATTTGTTTAATG 47210
|||| | | | | || || | ||||||| || ||||| || | | |||
Sbjct 77870 CCATTT-TGATCGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATG 77812
Query 47211 TCTTCTGGGA--GATT-AGTATTTTGAATAGATCCTCCgttttctataattttgtttttt 47267
| | ||| | |||| | ||||||| || ||||| | | |||||| || || ||
Sbjct 77811 TGCTGTGGTATGGATTCAATATTTTGTATGGATCCGCGACTGGTTATAATATTATTCTTC 77752
Query 47268 aattcatttgaccaaagttttcgt-tcagtta-atgtttttaaAAGATGAGGATTAACAA 47325
| |||| ||| || | || |||| || | | ||| ||| |||| ||||
Sbjct 77751 ATATCATCATCCCACAGNACCCAACTCGGTTAGATCGCGTAACAAG-TGATGATTTACAA 77693
Query 47326 TTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAG 47385
||||||||| || || || || | ||| |||| ||||| || || ||||| | |
Sbjct 77692 CTTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAAGTGTACGGTTCAAATG 77633
Query 47386 ATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGC 47445
| ||||| || || | |||||| || ||||| || || ||||||| |||| | ||
Sbjct 77632 ACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAG 77573
Query 47446 TATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTG 47505
|| | || |||| || | ||| | |||||| ||||||||| |
Sbjct 77572 AGTTGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAG 77513
Query 47506 ATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTAT 47565
||| || ||| | ||||| || ||||| || ||||| | || ||||| ||||
Sbjct 77512 TTGGTGTTTTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGGTGAACCTTTAT 77453
Query 47566 ATGTTTTATAAGGACCGTATAGTTT--AGCGAGTTCACAACTTGCTTCCAATGCACTATA 47623
| |||| ||| | || ||||||| ||| | ||| ||||| |||||||| || | |||
Sbjct 77452 ACGTTTCATAGGTGCC--ATAGTTTTCAGCTAATTCGCAACTGGCTTCCAAGGCGCCATA 77395
Query 47624 ATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATA 47683
|| || ||||| ||||||| || | | ||||||| ||| | || ||
Sbjct 77394 GTAAATAGTTTCGAATATTTGCTGATTCAAACGGAATGCTTCTTCACTTTCGTATGGGTA 77335
Query 47684 NNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGT 47743
|| | || || || ||||| | ||||||||||| || | ||| |
Sbjct 77334 ACGCATTAGAATTAAAGCGTCGGCAAAACCTTGTATGCCAATACCAATGGGACGATGTCT 77275
Query 47744 TTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAG 47803
||| || | || || || || ||||| | || || ||||| |||||||| ||
Sbjct 77274 GAAATTCGATTTCCTTGCCTCCGGCAAGGGATAATGATTAATGTCTATGATTTTATTCAG 77215
Query 47804 ANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATT--- 47860
| | |||| | | ||||| ||| || | || |
Sbjct 77214 ATTACGTGTAACGGTCTTTGTGACTTCTTTGAGGCGCTTAAAGTCATACGTTTTCTCGGG 77155
Query 47861 TATAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATT 47920
| | |||||| |||| | || || || || | || || ||||||||||||| ||
Sbjct 77154 TGTGACAAACATATTCAAGGCGATCGAAGCCAAGTTGCACACAGCTACCTCATCGGGTGA 77095
Query 47921 AGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATG 47980
| ||||| | ||||| | ||||| ||||| ||| || || || || | ||| || ||
Sbjct 77094 CGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTTG 77035
Query 47981 ATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTG 48040
|||| | ||||| || || || || | ||| | ||||| || || || | ||
Sbjct 77034 ATTACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTG 76975
Query 48041 AGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATC 48100
|||||||| || ||||| | | || ||||| | || ||
Sbjct 76974 CGATTCAATAATGCTAAACCAAAGACTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTC 76915
Query 48101 ATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGG 48160
||||| ||||| ||||||||| || || || || || | || | || ||| || ||
Sbjct 76914 CTGTTCATATTTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACCGGG 76855
Query 48161 ACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATAT 48220
||| | | |||||||| | ||||| || ||||| || ||| | |||||||||
Sbjct 76854 ACACTTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAG 76795
Query 48221 ATCTGGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTAT 48279
||| |||||||| | || ||| || ||||| || | | | ||||| |||||| | |
Sbjct 76794 ATCAGGTATCCATAAGGC-ATAGAACAAATCTCTGGCGCGATGCTCTTCTTTGCCAGTGT 76736
Query 48280 TCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCA 48339
| |||| | ||| | ||| || | |||||||||||||||||||| | || || || |
Sbjct 76735 TTTTTTTCAATTCCAAAAATTCGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAA 76676
Query 48340 TTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTC 48399
| |||||||||||| || |||||||| | ||| | || |||| || | ||||
Sbjct 76675 AGGCGCCTGGTCGTTTACCGCCACCTTGATCCACATAGCGTGCTATATTATTGAACACTC 76616
Query 48400 TTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAG 48459
||||| || || | |||||||||| | | ||| || ||| ||| | | || | |
Sbjct 76615 GCAACATAGGCACCAAACCATTTGATGTGCTATTTGTACCCACAATTGCAGTGCCTTTTG 76556
Query 48460 CTCTTAT---AT-TACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCA 48515
| | ||| || ||| || | ||| ||||| || || ||| || || | |||
Sbjct 76555 CACGTATGCAATGTAC--GTT--CAGACCAATACCGCCAGCAGATTTGGAAATCAATGCA 76500
Query 48516 CACCG-TTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAA 48574
|| | | | | | | | |||| || || || ||| || | ||| | | ||||||
Sbjct 76499 CATTGATGTGCAGATGTGA-AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAA 76441
Query 48575 ACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAAT 48634
|| |||| |||||| || ||| | | | || | |||||||| ||||| |
Sbjct 76440 GCATGATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGT 76381
Query 48635 AAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATG 48694
||| | || || | ||| || || ||||| || | | ||| || || |||
Sbjct 76380 AAAATAACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATG 76321
Query 48695 TATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTAT 48754
|||||| || | |||||||||||||||| || |||| |||||||||||| || |
Sbjct 76320 TATACCGATGGCAACACGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCGTTCAA 76261
Query 48755 TTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTT 48814
||| | | ||| || ||| | ||||||||||||||||| || || ||| |||
Sbjct 76260 TTTTAGCAAATAGGAACGTTCAAGCGTTTTAAAACCAAAATAATTATAACCAAAATCGCG 76201
Query 48815 ATCATTAATAATTGATGAATTTA 48837
||| |||||| | || ||||
Sbjct 76200 GGCATAAATAATGGCAGAGTTTA 76178
Score = 98.7 bits (108), Expect = 1e-15
Identities = 132/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 46972 CTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATAC 47031
|||| ||||||||||| | || | ||| |||| ||| || || ||||||||||| |
Sbjct 85126 CTTTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGC 85067
Query 47032 CAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAG 47091
||||||| | |||| |||| || |||||||| ||| ||| | ||| ||| | |
Sbjct 85066 CAGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGG 85007
Query 47092 GTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTG 47151
| || | | || || || | || ||||||||||| || |||||||| | ||| || |
Sbjct 85006 GCTCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAG 84947
Query 47152 CCAT 47155
||||
Sbjct 84946 CCAT 84943
>seq225
Length=233467
Score = 286 bits (316), Expect = 4e-72
Identities = 485/700 (69%), Gaps = 2/700 (0%)
Strand=Plus/Minus
Query 18795 ATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTAAC 18854
||| || ||||||| ||||| | ||| | | |||||||| || ||||| || ||
Sbjct 26879 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 26820
Query 18855 AGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGATAC 18914
|| | || || || | ||||| || || || || || || || || || || ||
Sbjct 26819 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 26760
Query 18915 AACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAATCACA 18974
|| || || | | | || | || | ||||| |||||||||||||| || |||||
Sbjct 26759 AATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACA 26700
Query 18975 ATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCC 19034
||| |||||||| |||| || | |||||| |||||||| || || ||||| | ||
Sbjct 26699 ATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACC 26640
Query 19035 TCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGC 19094
| ||| || | |||||| || |||||||| ||| ||||| |||||||| || ||
Sbjct 26639 ACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACGGC 26580
Query 19095 TGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGC 19154
||||| |||| || | ||| ||| | | || || |||||| || ||
Sbjct 26579 AGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAATCCAAGCAAGCGC 26520
Query 19155 CCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACG 19214
|||||| ||||| ||||| |||||||||||||||| ||| |||| || | |
Sbjct 26519 CCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAGTAATTCCT 26460
Query 19215 CTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATT 19274
| | | || |||| ||||| ||| || |||| || |||||||| ||||| | |||
Sbjct 26459 TTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCACATT 26400
Query 19275 TTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACA 19334
|| || || || |||||||| || || || | ||| ||||| | || ||||| ||
Sbjct 26399 CTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGCA 26340
Query 19335 AAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATAC 19394
|| | ||| || | ||||||||| || || |||||| || || ||||| ||||| ||
Sbjct 26339 GAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAACAC 26280
Query 19395 ATGTTTAATAAAATGTTTTTCA-TCTGAGGTTAATGTATTCCAATCATTAATATCTTTAG 19453
||| |||||||||| |||| | | || | | || |||||||| ||||||||||
Sbjct 26279 GTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGT-GCCCAATCATCCATATCTTTAG 26221
Query 19454 ATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGC 19493
| | ||||||||| | |||||||| || || || |||||
Sbjct 26220 AAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGC 26181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561884237534400
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