Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_016765.1
Length=54024
Score E
Sequences producing significant alignments: (Bits) Value
seq2983 145 3e-30
>seq2983
Length=44036
Score = 145 bits (160), Expect = 3e-30
Identities = 250/357 (70%), Gaps = 6/357 (2%)
Strand=Plus/Minus
Query 37261 CCAGTACGTCCGGTCTCGGATGTGCGGGGCACCGACGCCCGCAGACGGGAACGCA-ACAG 37319
|||||| | | ||||| |||||| || ||||||| ||||| ||| |||| | | ||
Sbjct 43129 CCAGTATGCTCTGTCTCTTTGGTGCGGAGCGCCGACGCTCGCAGCCGGAAACGGACATAG 43070
Query 37320 CCCCGAAGGCATACTCCATGGCTTCCAGGTCAGCTTGTACAAGGTCGAGCCAAGGCTCCG 37379
||| ||||| || |||| ||||||||||| |||||||||||||| ||| | | |
Sbjct 43069 CCCA-AAGGCGTAGCCCATTCTTTCCAGGTCAGTTTGTACAAGGTCGAACCATGCATTTG 43011
Query 37380 CGTC-CTTGCTTGC-AACCTGCTCACCAAGGACTTCTCCAGGGCGGCGCTGGCGGATGAG 37437
|| | | ||| || |||||| || |||| | | ||||||||||| ||||||
Sbjct 43010 CGCCACCTGC--GCTAACCTGTTCGCCAAAAATAACGAAAGGGCGGCGCTCTTCGATGAG 42953
Query 37438 CCAGGCAAAATGTGGCCAGAGATGACGCGGGTCATCAAACCCAGCTCCTTCGCCTGCCGA 37497
| || |||||||| || |||||||| || || || | |||| |||
Sbjct 42952 GCGTTTTGCGTGGGGCCAGAGGTGTCGCGGGTCGTCGAATCCGTCCCCTTTGCCGCTACT 42893
Query 37498 GGAGAAAGGTTGGCAAGGACAGGAACCGGTCCAAACAGGTCGATCATCTGGCCAGCCGGC 37557
| ||| || ||||| || ||||| | |||||| || || || || || |||| |||||
Sbjct 42892 GCTGAACGGCTGGCACGGGCAGGAGCAGGTCCAGACGGGGCGGTCGTCACGCCATCCGGC 42833
Query 37558 GCGGCGAAGGGCGAGCGACCAGACGCCGATTCCCGCGAAGAAGTGGCATTGTGTGTA 37614
||| |||||| |||||||||||||| || ||||| | ||| ||| |||||
Sbjct 42832 AGCGCGCAGGGCGTAGGACCAGACGCCGATCCCGGCGAATAGGTGTACTTGGGTGTA 42776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 172689635082720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |