Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq2983 145 3e-30 >seq2983 Length=44036 Score = 145 bits (160), Expect = 3e-30 Identities = 250/357 (70%), Gaps = 6/357 (2%) Strand=Plus/Minus Query 37261 CCAGTACGTCCGGTCTCGGATGTGCGGGGCACCGACGCCCGCAGACGGGAACGCA-ACAG 37319 |||||| | | ||||| |||||| || ||||||| ||||| ||| |||| | | || Sbjct 43129 CCAGTATGCTCTGTCTCTTTGGTGCGGAGCGCCGACGCTCGCAGCCGGAAACGGACATAG 43070 Query 37320 CCCCGAAGGCATACTCCATGGCTTCCAGGTCAGCTTGTACAAGGTCGAGCCAAGGCTCCG 37379 ||| ||||| || |||| ||||||||||| |||||||||||||| ||| | | | Sbjct 43069 CCCA-AAGGCGTAGCCCATTCTTTCCAGGTCAGTTTGTACAAGGTCGAACCATGCATTTG 43011 Query 37380 CGTC-CTTGCTTGC-AACCTGCTCACCAAGGACTTCTCCAGGGCGGCGCTGGCGGATGAG 37437 || | | ||| || |||||| || |||| | | ||||||||||| |||||| Sbjct 43010 CGCCACCTGC--GCTAACCTGTTCGCCAAAAATAACGAAAGGGCGGCGCTCTTCGATGAG 42953 Query 37438 CCAGGCAAAATGTGGCCAGAGATGACGCGGGTCATCAAACCCAGCTCCTTCGCCTGCCGA 37497 | || |||||||| || |||||||| || || || | |||| ||| Sbjct 42952 GCGTTTTGCGTGGGGCCAGAGGTGTCGCGGGTCGTCGAATCCGTCCCCTTTGCCGCTACT 42893 Query 37498 GGAGAAAGGTTGGCAAGGACAGGAACCGGTCCAAACAGGTCGATCATCTGGCCAGCCGGC 37557 | ||| || ||||| || ||||| | |||||| || || || || || |||| ||||| Sbjct 42892 GCTGAACGGCTGGCACGGGCAGGAGCAGGTCCAGACGGGGCGGTCGTCACGCCATCCGGC 42833 Query 37558 GCGGCGAAGGGCGAGCGACCAGACGCCGATTCCCGCGAAGAAGTGGCATTGTGTGTA 37614 ||| |||||| |||||||||||||| || ||||| | ||| ||| ||||| Sbjct 42832 AGCGCGCAGGGCGTAGGACCAGACGCCGATCCCGGCGAATAGGTGTACTTGGGTGTA 42776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172689635082720