Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq225 208 9e-49 >seq225 Length=233467 Score = 208 bits (230), Expect = 9e-49 Identities = 465/690 (67%), Gaps = 6/690 (1%) Strand=Plus/Minus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| || |||||||| || || | ||||||||| | || ||||| |||| || || Sbjct 26879 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 26820 Query 37070 TGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 || | || || | ||||| | | | | ||| | ||||| || || ||| | || Sbjct 26819 CGGCAAAGCGTCAGTTAAGAATTCCTGCT-CAATTTTAACAGCTTCAGAAATTATTTCAA 26761 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCAC 37188 |||| || | | |||| | | |||||| || |||| |||||||| || |||| Sbjct 26760 CAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCAC 26701 Query 37189 AATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAAC 37248 |||| | || ||||||| || | |||||| ||||| || || ||||||||||||| Sbjct 26700 AATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAAC 26641 Query 37249 CTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTG 37308 | | ||| |||| ||| || || | |||||| ||| ||||||||||||||||| | Sbjct 26640 CACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACGG 26581 Query 37309 CTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA-TAATCAGAAATCCAttttttt 37367 | |||||||| | | |||| ||| ||||||| | | | |||||||| Sbjct 26580 CAGCAAATGCAATTACACGTTCACC-AAAGTTGGCCGACTTCGAGGAAATCCAAGCAAGC 26522 Query 37368 GTCCAATCTGCCTT-TAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtt 37426 | |||||||||||| |||| || | ||||| || || || || || | | || Sbjct 26521 GCCCAATCTGCCTTACGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGTAATT 26463 Query 37427 tttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAAT 37486 ||| || || | ||||| |||||||||| || |||||||||||||| || | Sbjct 26462 CCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCAC 26403 Query 37487 ATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTT 37546 ||| || || || || ||||| ||||| || || | || || | | ||| || || | Sbjct 26402 ATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTG 26343 Query 37547 AAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAG 37606 | || | | | ||| |||||||| || || |||||| || || || || || | Sbjct 26342 GCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAA 26283 Query 37607 AACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTT 37666 || | | |||||||||| ||||| || | || | |||||||| |||||||| Sbjct 26282 CACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATCCATATCTTT 26223 Query 37667 TGATAAATCAACTTCATCAACGGTCCAAAA 37696 || | ||| ||||| | || ||||| || Sbjct 26222 AGAAAGATCTACTTCCCCTACTGTCCAGAA 26193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592080169438400