Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq225 208 9e-49
>seq225
Length=233467
Score = 208 bits (230), Expect = 9e-49
Identities = 465/690 (67%), Gaps = 6/690 (1%)
Strand=Plus/Minus
Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069
||| || |||||||| || || | ||||||||| | || ||||| |||| || ||
Sbjct 26879 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 26820
Query 37070 TGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128
|| | || || | ||||| | | | | ||| | ||||| || || ||| | ||
Sbjct 26819 CGGCAAAGCGTCAGTTAAGAATTCCTGCT-CAATTTTAACAGCTTCAGAAATTATTTCAA 26761
Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCAC 37188
|||| || | | |||| | | |||||| || |||| |||||||| || ||||
Sbjct 26760 CAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCAC 26701
Query 37189 AATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAAC 37248
|||| | || ||||||| || | |||||| ||||| || || |||||||||||||
Sbjct 26700 AATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAAC 26641
Query 37249 CTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTG 37308
| | ||| |||| ||| || || | |||||| ||| ||||||||||||||||| |
Sbjct 26640 CACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACGG 26581
Query 37309 CTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA-TAATCAGAAATCCAttttttt 37367
| |||||||| | | |||| ||| ||||||| | | | ||||||||
Sbjct 26580 CAGCAAATGCAATTACACGTTCACC-AAAGTTGGCCGACTTCGAGGAAATCCAAGCAAGC 26522
Query 37368 GTCCAATCTGCCTT-TAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtt 37426
| |||||||||||| |||| || | ||||| || || || || || | | ||
Sbjct 26521 GCCCAATCTGCCTTACGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGTAATT 26463
Query 37427 tttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAAT 37486
||| || || | ||||| |||||||||| || |||||||||||||| || |
Sbjct 26462 CCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCAC 26403
Query 37487 ATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTT 37546
||| || || || || ||||| ||||| || || | || || | | ||| || || |
Sbjct 26402 ATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTG 26343
Query 37547 AAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAG 37606
| || | | | ||| |||||||| || || |||||| || || || || || |
Sbjct 26342 GCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAA 26283
Query 37607 AACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTT 37666
|| | | |||||||||| ||||| || | || | |||||||| ||||||||
Sbjct 26282 CACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATCCATATCTTT 26223
Query 37667 TGATAAATCAACTTCATCAACGGTCCAAAA 37696
|| | ||| ||||| | || ||||| ||
Sbjct 26222 AGAAAGATCTACTTCCCCTACTGTCCAGAA 26193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592080169438400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |