Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_019451.1 Length=66116 Score E Sequences producing significant alignments: (Bits) Value seq2983 107 8e-19 >seq2983 Length=44036 Score = 107 bits (118), Expect = 8e-19 Identities = 294/443 (66%), Gaps = 17/443 (4%) Strand=Plus/Plus Query 15425 ACCACGCCGTCCATCCCGACTCCCATCCAGTTCCTGCAGACCTGGTTGCCTGGCTTCGTG 15484 |||| ||||| ||| |||| || ||||||||| | ||| ||| | || ||||||||| Sbjct 13962 ACCAACCCGTCTATCGCGACGCCGATCCAGTTCTTACAGGAATGGCTCCCGGGCTTCGTG 14021 Query 15485 AAAGTCATGACCGCAGCGCGGAAGATCGACGAAATCATCGGCATCGATACCGTTGGCTCC 15544 |||| |||| | || || ||||||| | ||||| | | ||| | || || Sbjct 14022 CGCTTCATTACCGGTGTACGTAAAATCGACGCCCTTGTCGGCCTGGCGACCATCGGATCG 14081 Query 15545 TGGGACGATCAAGAGATCGTTCAAGGCATCGTGGA---GCCGGCCGGCACTGCGGTGGAA 15601 ||||| || |||| |||| || || |||| || || |||| ||| || Sbjct 14082 TGGGAAGACGAAGAAGTCGTACAGGGTTCTATGGAACTGCTGGGCGGC---GCGCTGCCG 14138 Query 15602 TACGGCGACCATACCAACATCCCGCTGACCAGCTGGAATGCCAACTTCGAACGCCGCACC 15661 ||| ||| || ||| || ||||||||||||||||| || |||| ||| | || || Sbjct 14139 TACTCCGATTATGGCAATATTCCGCTGACCAGCTGGAACGCTAACTATGAAGGTCGTACG 14198 Query 15662 ATCGTTCGTGGCGAGCTGGGCATGATGGTGGGTACCCTGGAAGAGGGTCGCGCCTCGGCC 15721 |||| || |||||||||| | | || ||| |||||||| | | ||| || || Sbjct 14199 GTCGTACGCTTCGAGCTGGGCTTTAACGTTGGTCTGCTGGAAGAAG--CCCGCACCGCCC 14256 Query 15722 ATCCGTCTGAACAGCGCCGAAACC---AAGCGC-CAACAGGCGGCCATCGGTCTGGAAAT 15777 | || | | || ||| || |||||| | | | | | | | |||||||| Sbjct 14257 GTGCG-CGCATCAATTCCGCGTCCGAGAAGCGCGCGAGCGTCACTGAGCAG-CTGGAAAT 14314 Query 15778 CTTCCGCAACGCCATCGGTTTCTACGGCTGGCAGAGCGGCCTGGGCAACCGCACCTATGG 15837 | ||| |||| ||||| || || |||| | | ||| |||||| || | ||| Sbjct 14315 CCGCCGTAACGAAATCGGCTTTTATGGCTTTAACAACGG---TACCAACCGTACGTTTGG 14371 Query 15838 TTTCCTGAACGATCCCAACCTGC 15860 |||||||||||||| ||||||| Sbjct 14372 CTTCCTGAACGATCCAAACCTGC 14394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211364038984120