Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq609 104 2e-17 seq749 102 7e-17 seq2732 91.5 1e-13 >seq609 Length=128410 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| || || || ||||| ||||| ||||| ||||| ||| || || ||| Sbjct 92741 AAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCCT 92800 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || |||| |||||| ||||||||||| | ||| |||| Sbjct 92801 TCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCAGAT 92860 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 |||||| | | ||||| || || ||||||||||||||| | || || |||| || Sbjct 92861 CAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGTACCTTGTCCGACTAC 92920 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| ||||| || || || || || |||| Sbjct 92921 AACATCCAAAAGGAGTCAACCCTCCATTTGGT 92952 >seq749 Length=113903 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| || ||||||||||| ||||| || |||||||| Sbjct 710 ATGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCC 651 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | || ||||||| || ||||| ||||| | || |||||| Sbjct 650 GATACAATTGAAAACGTTAAAGCAAAAATTCAG-GACAAGGAGGGTATTCCTCCAGATCA 592 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | | ||||| || || || ||||||||||| || || ||||||| || Sbjct 591 ACAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAA 532 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||| ||||| ||||||||||| ||| ||||||| Sbjct 531 CATCCAAAAGGAATCTACTCTTCACTTGGTATT 499 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || | || || |||||||||||| || |||||||| Sbjct 255 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTC 196 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | | | ||| || ||| || || || || | ||| |||||| Sbjct 195 AGATACCATTGAGAACGTTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCAGATCA 136 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || | | ||||| || |||||||||||||| || || || ||||||| || Sbjct 135 GCAACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACAA 76 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||| |||||||| |||||||| ||| ||||||| Sbjct 75 CATCCAAAAAGAGTCTACTCTTCACTTGGTATT 43 >seq2732 Length=47336 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 28542 GATTGTGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAA 28601 |||||| | |||||||||||| |||||||| | |||||||| ||||| || || Sbjct 1844 GATTGTTCAGCAATGCAAATATTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAG 1785 Query 28602 ACGGAACCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTG 28661 || ||||| || || | | || | ||| ||||| || || || ||| | Sbjct 1784 GTTGAGCCTTCGGATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATT 1725 Query 28662 CCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATG 28721 || ||||||||| | || || ||||| || || |||||||||||| | || || Sbjct 1724 CCGCCTGATCAACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTG 1665 Query 28722 GCCGATTATAACATTCAAAAAGAATCTACTCTGCA 28756 || || ||||| ||||| ||||| ||||| |||| Sbjct 1664 GCTGACTATAATATTCAGAAAGAGTCTACATTGCA 1630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425239099512840