Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq291 118 5e-22 >seq291 Length=196152 Score = 118 bits (130), Expect = 5e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||||| ||| || ||||| | ||||| || |||||||| || | |||||||| Sbjct 76803 CATAAATAGATCAGGTATCCATAAGGCATAGAACAAATCTCTGGCGCGATGCTCTTCTTT 76744 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| || ||||| | || || || || |||||||| | ||||||||||| | | Sbjct 76743 GCCAGTGTTT-TTTTTCAATTCCAAAAATTCGAAAATATCAGCATGCCATGGTTCCAGGT 76685 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 |||| ||||| ||| || ||| || ||||||||||| || || | ||| | | || Sbjct 76684 AGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTTGATCCACATAGCGTGCTATATTAT 76625 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 |||| ||| |||||| || || || ||| |||| Sbjct 76624 TGAACACTCGCAACATAGGCACCAAACCATTTGA 76591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252941437757000