Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq709 102 9e-17 >seq709 Length=118196 Score = 102 bits (112), Expect = 9e-17 Identities = 170/242 (70%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||| ||||| ||||| | ||||| || ||||| |||||||| || ||||| ||||| || Sbjct 50709 TACGCCAATCGGACCCATACCAGGGCCGCCACCACCATGTGGTATGCAGAAAGTCTTGTG 50650 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 || ||| | |||| | ||||| ||||| || | || |||||| |||||||| Sbjct 50649 TAGATTCAAATGAGAGACATCACTGCCATAATCGCCGGGACGACATAGACCCACCTGTGC 50590 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA--CGATCTTACAT 138359 ||| | ||| || || || | |||||||| || |||| | ||| | |||| | || Sbjct 50589 ATTCATATTAGCGCCGTCCAAGTATACCTGTCCGCCATGTTTATGGATCAGATCGCATAT 50530 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 ||| | | || | ||||||||||| || |||||||| || ||||| | ||| Sbjct 50529 ATCAG-CAACAGTCT-CCTCAAATACACCCATTGTGGATGGATAGGTGATCATCAGACAG 50472 Query 138420 GA 138421 || Sbjct 50471 GA 50470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578767090139200