Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2899 154 4e-32
seq291 122 3e-22
seq2023 118 3e-21
seq312 118 3e-21
seq324 91.5 4e-13
seq969 87.8 5e-12
>seq2899
Length=45015
Score = 154 bits (170), Expect = 4e-32
Identities = 210/293 (72%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643
||||||||||| ||||| |||||||| ||| | || || || |||||||| || ||
Sbjct 22344 TTGATTAAACGCCGCTGTATATAACCCGTTTCTGCAGTCTTCACGGCTGTATCGATAAGT 22403
Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703
|| |||| || ||||| ||||||||| | | ||| ||| ||| ||| | | |
Sbjct 22404 CCTTCACGTCCGCCCATTGCATGGAAGTAGAACTCACTTGGTGTTAGGCCCGCTAGGTAT 22463
Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763
|| |||| ||||| || || ||||| ||| || ||| |||| ||||||||||||
Sbjct 22464 GAATTCTCGACGAAGCCGCGTGCCTCTGGCCCATAATCGTCCTTGATAAAGTGTGGCATT 22523
Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC 302823
|||| || | | ||||| || ||||| || || || ||||||||||| || | |||
Sbjct 22524 GTCCGTTTACGAAAACCGTAAGGTATACGTTTACCTTCGACGTTCTGCTGCCCAACGCAG 22583
Query 302824 GAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876
| ||||| || || || || | || | |||||||| ||||| |||||||
Sbjct 22584 GCAATCACTTGTGATATGTTAATATTAGAACCCTTGGAACCAGCGATTACCAT 22636
Score = 87.8 bits (96), Expect = 5e-12
Identities = 115/157 (73%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 233263 AAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACC 233322
|||| || ||| || |||| ||| ||||||||||||||| ||||| | ||| |||||
Sbjct 39725 AAATTGTGCAGCTCCATGAGATATCTGACAATCACGTTCCATCTCACCGAAACGTAGACC 39784
Query 233323 ACCATCATTTGACCTACCCTGGACTGTTTGACG-AGTTAAAACAGTTCTTGGACCCTGAG 233381
||||||| || |||||||| | | ||| || | | ||| | || | ||||| | |
Sbjct 39785 ACCATCACGTGCCCTACCCTCCATAGGTTGGCGCACTAAAATCTGTAC-GGGACCACGTG 39843
Query 233382 CACGATAATTAATTTTATCTTTAACCATATGCTTCAG 233418
||||| | | |||||| || | ||||| ||||| ||
Sbjct 39844 CACGAGAGTGAATTTTGTCATCCACCATGTGCTTGAG 39880
>seq291
Length=196152
Score = 122 bits (134), Expect = 3e-22
Identities = 574/896 (64%), Gaps = 13/896 (1%)
Strand=Plus/Minus
Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690
||||| ||||| || || | ||| || ||| || ||||| | ||||| || |||
Sbjct 77090 TATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTTGATTA 77031
Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750
|| | ||||||||||| || || | |||||||| || || ||||||| || |
Sbjct 77030 CTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGAT 76971
Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810
|| | ||| | | ||| || | || || |||| ||| ||| | ||||||
Sbjct 76970 TCAATAATGCTAAACCAAAGACTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGT 76911
Query 155811 TCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCAC 155870
|||||||||| ||| | | || | | || ||||| | ||| | || || |||
Sbjct 76910 TCATATTTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACCGGGACAC 76851
Query 155871 TTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCA 155930
|| | || || | |||||||| || || | |||||| | |||||||| ||||
Sbjct 76850 TTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGATCA 76791
Query 155931 CTCGCCCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCC-GTGATTCT 155988
||| | |||||||| | || || || | || ||| || | ||| ||| || |
Sbjct 76790 GGTATCCATAAGGCATAGAACAAATCTCTGGCGCGATG-CTCTTCTTTGCCAGTG-TTTT 76733
Query 155989 TCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA-A 156047
| | || || ||||| |||||||| ||| ||| ||||| || || |||||
Sbjct 76732 TTTTCAATTCCAAAAATTCGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGG 76673
Query 156048 CTACCATTCCTCT--TGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105
| | || | | |||||| ||||| ||||| || || | |||||||| || | |
Sbjct 76672 CGCCTGGTCGTTTACCGCCACCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCA 76613
Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGC-GAACCAGATGAG 156164
|||||| | | |||||| || |||| ||| || || ||| ||| | || ||
Sbjct 76612 ACATAGGCACCAAACCATTTGATGTGCTATTTGTACCCACAAT-TGCAGTGCCTTTTGCA 76554
Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224
|| | ||| | | || |||||||| || | |||| ||||| || ||||
Sbjct 76553 CGTATGCAATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGA 76494
Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284
| | ||| |||||||||| ||||| ||||| || |||| | |||||| |||| ||
Sbjct 76493 TGTGCAGATGTGAAAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGAT 76434
Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344
||||| || | || |||| ||| || || || | ||||| |||||||
Sbjct 76433 GACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAA 76374
Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTC-TCAAGATTAGACCCGTGAATACA 156403
| || | | | ||| || || | || | || | | || || ||||
Sbjct 76373 CGTTCGGAAAGCAAGTTGTAAGTTTCGAT-TGCTGCATCGATGTCTTCGCCATGTATACC 76315
Query 156404 GATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCC-ATCAATTCGCA 156462
||| | || | ||| |||||||||| || ||||| ||||| || |||||| |
Sbjct 76314 GATGGCAACACGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCGTTCAATT-TTA 76256
Query 156463 GAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGG 156518
| | || | ||||| || |||||||| || ||||||| | | |||||| |||
Sbjct 76255 GCAAATAGGAACGTTCAAGCGTTTTAAAACCAAAATAATTATAACCAAAATCGCGG 76200
>seq2023
Length=58511
Score = 118 bits (130), Expect = 3e-21
Identities = 227/333 (68%), Gaps = 4/333 (1%)
Strand=Plus/Minus
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
||||| ||||||||||| ||||| || | | ||| || | || | ||| || || | |
Sbjct 42080 CCAACCGCATCAATTTCATCAATAAACAAAATACATGGTGCATGCTTTCTAGCCATGGAA 42021
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| | |||| ||||| || | || | ||||||| ||||||| | ||| || ||| ||
Sbjct 42020 AACATATCTCGAACACGTGACGGACCTACACCAACAAACATTTCCAAAAACTCGGAACCG 41961
Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209
||||| || || | ||||||||||| || || |||| | || | | ||| ||
Sbjct 41960 GATACGCTTATAAAAGGAACATTTGCTTCACCAGCGGTTGCCTTTGCTAATAATGTTTTT 41901
Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTA 289269
||||| |||||||| || | | | | || ||||| | |||||| || | ||
Sbjct 41900 CCTGTACCAGGTGGACCTGTGAGCATAGCACCTTTTGGAATTTTTGCGCCGAGATCAATA 41841
Query 289270 TATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCA 289329
|||| | ||| | ||||| || | |||| |||| || ||| ||| || || |||
Sbjct 41840 TATTGTTGAGGATTTTTTAAGAAGTTCACAAATTCCATAATTTCGATTTTGGCTTCCTCA 41781
Query 289330 CATCCTGCTACAT--CAGCAAAA--GTAATATT 289358
|| || || |||| | |||||| | ||||||
Sbjct 41780 CAACCCGCAACATCCCTGCAAAATTGCAATATT 41748
>seq312
Length=186961
Score = 118 bits (130), Expect = 3e-21
Identities = 191/272 (70%), Gaps = 6/272 (2%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| ||| || | |||||| ||||||||||| ||| || || || ||||| |||
Sbjct 166645 TCCATAGCCTTTATAAGACGACGTTGAATATAACCGGTTTCAGCAGTCTTGACAGCAGTA 166586
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694
|| || ||||| |||||||||||||||| || ||| | | ||| ||| | ||
Sbjct 166585 TCGATAAGACCTTCACGACCACCCATAGCGTGAAAGTAGAACTCGGAAGGTGTCAAGCCG 166526
Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTA 302751
||| | | || |||| ||||| ||||||| ||| || || ||||||| || |
Sbjct 166525 GCAAGATATGAATTCTCCACGAAGCCACGCGACTCAGGACCGTAATCGTC---TTTAATG 166469
Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811
|| || |||| || | || | |||||||| ||||| || || || ||||||||
Sbjct 166468 AAATGCGGCAATGTGCGTTTACGGAAACCGTATGGTATACGTTTACCTTCGACGTTCTGT 166409
Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|| |||| || | ||| | ||| || |||||
Sbjct 166408 TGACCCACACAAGCAATAACCTGTGAGATATT 166377
>seq324
Length=182476
Score = 91.5 bits (100), Expect = 4e-13
Identities = 192/283 (68%), Gaps = 5/283 (2%)
Strand=Plus/Plus
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
||||| || | |||||| |||||| | ||||| | ||| ||||||||| | |
Sbjct 26759 AAATAGATCGCGTACACGTCTTGCTCCCTGGCCAACGAGTACTTCATCAAATTCAGGACC 26818
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
| | || | ||||| || ||||| ||||| || || || | || || || || ||
Sbjct 26819 AGCAGCATGGAAGAATGGAACGTTTGCCTCGCCAGCCACCGCACGTGCAAGTAGCGTTTT 26878
Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268
|| || ||||| ||||| ||||||| || || ||||| | ||| |||| || | |
Sbjct 26879 GCCAGTACCAGGAGGTCCAACTAATAGCACACCTTTTGGCAATTTACCCCC--CAAATTG 26936
Query 289269 --ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326
| | || ||||| || || | |||||| || | || | | || | ||| || |||
Sbjct 26937 GAAAACTTTTCAGGACTTTTAAGAAATTCCACGACCTCTTTTAACTCTTGTTTAGCTTCA 26996
Query 289327 TCACATCCTGCTACATCAGCAAAAGTAATATTAATATCGTTCT 289369
|||||||| |||||| |||| || | || ||| || ||||
Sbjct 26997 TCACATCCCTTAACATCATCAAATGTCACATGAATTTC-TTCT 27038
>seq969
Length=96674
Score = 87.8 bits (96), Expect = 5e-12
Identities = 122/169 (72%), Gaps = 4/169 (2%)
Strand=Plus/Minus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| | | ||||| ||||| || ||||||||||| | ||||| ||||| |||
Sbjct 62043 GCACCATATGAAATCAAGCAATCTCGCTCCATTTCACCCAAACGCAAGCCACCTTCAC-- 61986
Query 233333 GAC--CTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAAT 233390
||| | ||| || | |||||| |||| || | | ||||||| | ||||| ||
Sbjct 61985 GACTGCGACCTTGCGTGGGTTGACGCGTTAGCACCGCTTTTGGACCGCGCGCACGTGCAT 61926
Query 233391 TAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACC 233439
|||||||||| ||||||||||||||| || |||||| ||||||
Sbjct 61925 GCATTTTATCTTGCACCATATGCTTCAGTTTCTGATAATACACCGGACC 61877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471214909090520
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