Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq609 105 4e-18 seq749 98.7 6e-16 seq1128 91.5 1e-13 seq2732 86.0 4e-12 >seq609 Length=128410 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| || | ||| |||||| || ||||| ||||| || | | | || |||| Sbjct 92956 CAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATC 92897 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||| |||||||||||||||| || || || ||| | || | ||||| ||||| Sbjct 92896 TTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTC 92837 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| |||||| | | || | ||| | |||||| || | ||| ||||| Sbjct 92836 TTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGT 92777 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || | ||| || || || |||||||| Sbjct 92776 CTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744 >seq749 Length=113903 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || ||||||||| ||||| ||||| || | |||| | || ||| Sbjct 274 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGTCCGTCCTCC 333 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| ||||||||||||| ||||| || ||| | || | |||||||| || | Sbjct 334 AATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGAATACCCTCCTTATCTTGG 393 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || || ||| | || | || | ||| || || | || ||||| || Sbjct 394 ATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAAAGTGATGGTTTTG 453 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| ||||| ||||| Sbjct 454 CCGGTGAGGGTCTTTACGAAGATTTGCAT 482 >seq1128 Length=88325 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| || || ||||| || | | || |||| || |||||||| ||||||||| Sbjct 301 TCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAG 242 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||| || ||| | || | |||||||| || | ||||| |||||| || Sbjct 241 ATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGGATTTTGGCTTTGAC--AT 184 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || || | || | ||| || || | ||| || || || || ||||| ||||| | Sbjct 183 TCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCA 124 Query 34965 CAAAGATCTGCAT 34977 | ||||| ||||| Sbjct 123 CGAAGATTTGCAT 111 >seq2732 Length=47336 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| |||||||| |||||||| | | |||| |||| |||| |||||||||||| || Sbjct 1641 CTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCCAATTGCTTTCCGGCAAA 1700 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || || || || |||| | || ||||| || | ||||| || || Sbjct 1701 AATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATG 1760 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | ||| || |||| || |||||||| ||||| ||||| ||||| Sbjct 1761 TTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTAC 1820 Query 34966 AAAGATCTGCAT 34977 || || ||||| Sbjct 1821 GAATATTTGCAT 1832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325565938583240