Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq609 105 4e-18
seq749 98.7 6e-16
seq1128 91.5 1e-13
seq2732 86.0 4e-12
>seq609
Length=128410
Score = 105 bits (116), Expect = 4e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| || | ||| |||||| || ||||| ||||| || | | | || ||||
Sbjct 92956 CAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATC 92897
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|||| ||| |||||||||||||||| || || || ||| | || | ||||| |||||
Sbjct 92896 TTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTC 92837
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| ||||| |||||| | | || | ||| | |||||| || | ||| |||||
Sbjct 92836 TTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGT 92777
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || || | ||| || || || ||||||||
Sbjct 92776 CTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744
>seq749
Length=113903
Score = 98.7 bits (108), Expect = 6e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||||| || ||||||||| ||||| ||||| || | |||| | || |||
Sbjct 274 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGTCCGTCCTCC 333
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
| |||||| ||||||||||||| ||||| || ||| | || | |||||||| || |
Sbjct 334 AATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGAATACCCTCCTTATCTTGG 393
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
|| || || ||| | || | || | ||| || || | || ||||| ||
Sbjct 394 ATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAAAGTGATGGTTTTG 453
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||||||||||||| ||||| |||||
Sbjct 454 CCGGTGAGGGTCTTTACGAAGATTTGCAT 482
>seq1128
Length=88325
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||| || || ||||| || | | || |||| || |||||||| |||||||||
Sbjct 301 TCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAG 242
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||||| || ||| | || | |||||||| || | ||||| |||||| ||
Sbjct 241 ATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGGATTTTGGCTTTGAC--AT 184
Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
|| || | || | ||| || || | ||| || || || || ||||| ||||| |
Sbjct 183 TCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCA 124
Query 34965 CAAAGATCTGCAT 34977
| ||||| |||||
Sbjct 123 CGAAGATTTGCAT 111
>seq2732
Length=47336
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| |||||||| |||||||| | | |||| |||| |||| |||||||||||| ||
Sbjct 1641 CTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCCAATTGCTTTCCGGCAAA 1700
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| || || || || || |||| | || ||||| || | ||||| || ||
Sbjct 1701 AATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATG 1760
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | || | ||| || |||| || |||||||| ||||| ||||| |||||
Sbjct 1761 TTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTAC 1820
Query 34966 AAAGATCTGCAT 34977
|| || |||||
Sbjct 1821 GAATATTTGCAT 1832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325565938583240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |