Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2732 129 9e-25 seq749 111 2e-19 >seq2732 Length=47336 Score = 129 bits (142), Expect = 9e-25 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| ||||||| | || || || || || ||| |||| || || | | | Sbjct 1831 TGCAAATATTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTCGG 1772 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| || |||| || ||||| ||| ||| ||||| ||||| || ||||||| Sbjct 1771 ATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCGCCTGATCAAC 1712 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || |||||||| || || ||||| || ||| | | || || | || ||||||| Sbjct 1711 AGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATAATA 1652 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || ||||| || || | ||||||||| | || | ||||| || Sbjct 1651 TTCAGAAAGAGTCTACATTGCATTTAGTACTTCGTCTTAGAGGTGG 1606 >seq749 Length=113903 Score = 111 bits (122), Expect = 2e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| || || || |||||||||||| | || || |||| | || Sbjct 709 TGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCCG 650 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||| || ||| ||||| || || || || ||||| || ||||||| Sbjct 649 ATACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCAAC 590 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || ||||| ||||| || || | || || | ||||| || | Sbjct 589 AACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAACA 530 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| ||| | || || ||||| || Sbjct 529 TCCAAAAGGAATCTACTCTTCACTTGGTATTGCG 496 Score = 95.1 bits (104), Expect = 2e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || ||||| ||||| | || || |||| | | Sbjct 253 TGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTCAG 194 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | || || || ||| || ||| ||| ||||||||||| || ||||| | Sbjct 193 ATACCATTGAGAACGTTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCAGATCAGC 134 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || || |||||||| || || | || || | ||||| || | Sbjct 133 AACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACAACA 74 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | |||||||| || ||| | || || ||||| || Sbjct 73 TCCAAAAAGAGTCTACTCTTCACTTGGTATTGCG 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785852326523200