Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq749 114 1e-20 seq1128 100 3e-16 seq2732 93.3 4e-14 >seq749 Length=113903 Score = 114 bits (126), Expect = 1e-20 Identities = 154/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||||| ||||| || || || ||||| || ||| || ||| | | | ||||| | Sbjct 733 AAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCA-TCCTCCAA 791 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| ||| |||| | || || || || || ||||| |||||||| || ||| Sbjct 792 CTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCT-TGAA 850 Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| || | ||||| || |||| ||||| || || | |||| |||||| | Sbjct 851 TTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTC 910 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661 | |||| |||||| ||||||||||||||| Sbjct 911 CCGTCAAAGTTTTGACGAAAATCTGCATG 939 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || |||||||| || || ||||||||| || || ||| |||||| | || |||| Sbjct 58 GTAGACTCTTTTTGGATGTTGTAATCGGACAAGGT--ACGTCCGTCCTCCAATTGTTTGC 115 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | || ||||| || || || ||||||||||| || |||||| || Sbjct 116 CGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTATCTTGGATCTTAGCCT 175 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| || || | || || || || | ||| | ||||||||| || || | Sbjct 176 TAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATGGTTTTGCCAGTGAGGG 235 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 236 TCTTCACGAAGATTTGCAT 254 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| ||| || ||| |||||| | ||||| || Sbjct 286 GTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGTCCGTCCTCCAATTGCTTACCG 345 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | || || || || ||||| || || ||||| || |||||| ||| Sbjct 346 GCGAAGATCAAACGTTGTTGATCTGGAGGAATACCCTCCTTATCTTGGATCTTGGCCTTT 405 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||||| || || | ||||| || || | |||| |||||||||||| || || Sbjct 406 ACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAAAGTGATGGTTTTGCCGGTGAGGGTC 465 Query 133644 TTTACGAAAATCTGCAT 133660 |||||||| || ||||| Sbjct 466 TTTACGAAGATTTGCAT 482 >seq1128 Length=88325 Score = 100 bits (110), Expect = 3e-16 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || || || |||||||||||||| ||| || || | | | ||||| || Sbjct 316 AAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCA-TCCTCAAG 258 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| ||| | || | || || || || || ||||| || ||||| || ||| Sbjct 257 TTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGGAT 198 Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| || | ||||| || || | ||||| || || | ||||| ||||||| Sbjct 197 -TTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTTTGC 139 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| || ||||| || ||||| Sbjct 138 CGGTGAGAGTCTTCACGAAGATTTGCAT 111 >seq2732 Length=47336 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||||||||| ||||| || || ||| ||| ||| | || || | Sbjct 1627 AAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCA-TCTTCCAA 1685 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || |||| || ||||| || || || || || |||||||| || ||| Sbjct 1686 TTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATC-TTGAA 1744 Query 133574 CTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| | ||| | || |||| || || | ||||| || || | |||| ||| || | Sbjct 1745 TTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTAC 1804 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 | || || ||||||||||| || ||||| ||| Sbjct 1805 CCGTAAGGGTTTTTACGAATATTTGCATTGCT 1836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483227673390400