Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq749 114 1e-20
seq1128 100 3e-16
seq2732 93.3 4e-14
>seq749
Length=113903
Score = 114 bits (126), Expect = 1e-20
Identities = 154/209 (74%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||||| ||||| || || || ||||| || ||| || ||| | | | ||||| |
Sbjct 733 AAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCA-TCCTCCAA 791
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| ||||| ||| |||| | || || || || || ||||| |||||||| || |||
Sbjct 792 CTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCT-TGAA 850
Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| || | ||||| || |||| ||||| || || | |||| |||||| |
Sbjct 851 TTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTC 910
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||| |||||| |||||||||||||||
Sbjct 911 CCGTCAAAGTTTTGACGAAAATCTGCATG 939
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|| |||||||| || || ||||||||| || || ||| |||||| | || ||||
Sbjct 58 GTAGACTCTTTTTGGATGTTGTAATCGGACAAGGT--ACGTCCGTCCTCCAATTGTTTGC 115
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | || ||||| || || || ||||||||||| || |||||| ||
Sbjct 116 CGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTATCTTGGATCTTAGCCT 175
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| || || | || || || || | ||| | ||||||||| || || |
Sbjct 176 TAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATGGTTTTGCCAGTGAGGG 235
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| || |||||
Sbjct 236 TCTTCACGAAGATTTGCAT 254
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| ||| || ||| |||||| | ||||| ||
Sbjct 286 GTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGTCCGTCCTCCAATTGCTTACCG 345
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || | || || || || ||||| || || ||||| || |||||| |||
Sbjct 346 GCGAAGATCAAACGTTGTTGATCTGGAGGAATACCCTCCTTATCTTGGATCTTGGCCTTT 405
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||||| || || | ||||| || || | |||| |||||||||||| || ||
Sbjct 406 ACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAAAGTGATGGTTTTGCCGGTGAGGGTC 465
Query 133644 TTTACGAAAATCTGCAT 133660
|||||||| || |||||
Sbjct 466 TTTACGAAGATTTGCAT 482
>seq1128
Length=88325
Score = 100 bits (110), Expect = 3e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || || || |||||||||||||| ||| || || | | | ||||| ||
Sbjct 316 AAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCA-TCCTCAAG 258
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||||| ||| | || | || || || || || ||||| || ||||| || |||
Sbjct 257 TTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGGAT 198
Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| || | ||||| || || | ||||| || || | ||||| |||||||
Sbjct 197 -TTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTTTGC 139
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| || ||||| || |||||
Sbjct 138 CGGTGAGAGTCTTCACGAAGATTTGCAT 111
>seq2732
Length=47336
Score = 93.3 bits (102), Expect = 4e-14
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||||||||| ||||| || || ||| ||| ||| | || || |
Sbjct 1627 AAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCA-TCTTCCAA 1685
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || |||| || ||||| || || || || || |||||||| || |||
Sbjct 1686 TTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATC-TTGAA 1744
Query 133574 CTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| | ||| | || |||| || || | ||||| || || | |||| ||| || |
Sbjct 1745 TTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTAC 1804
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664
| || || ||||||||||| || ||||| |||
Sbjct 1805 CCGTAAGGGTTTTTACGAATATTTGCATTGCT 1836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483227673390400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |