Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq291 215 1e-50
seq1198 93.3 1e-13
seq312 91.5 3e-13
>seq291
Length=196152
Score = 215 bits (238), Expect = 1e-50
Identities = 578/871 (66%), Gaps = 37/871 (4%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||||||||| ||||| ||||||||| | ||||| || | || ||| | || ||
Sbjct 76219 TATTTTGGTTTTAAAACGCTTGAACGTTCCTATTTGCTAAAATTGAACGGCAAAATTGTT 76278
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|| || || || || ||||| | |||||||| || ||||| ||||| | || || |
Sbjct 76279 GAGCGACCACAGCATATGTTAATGCGTGTTGCCATCGGTATACATGGCGAAGACATCGAT 76338
Query 110424 GCTGTTATTGAATGTTATGA--TGTATTAAGTAAAAAGAAAGCTATT-----CATGCTAC 110476
|| | || ||| ||| | || || | || | |||| |||||| |
Sbjct 76339 GCAGCAATCGAAACTTACAACTTGCTTTCCG-------AACGTTATTTTACACATGCTTC 76391
Query 110477 TCCTACCCTATTTAACGCAGGAACTAATGGAGGA-CAATTGGCTTCTTGCTTTCTTCTAG 110535
||| || || || || | ||||| | || |||||| | || |||||||| ||
Sbjct 76392 TCCAACGCTTTTCGCTGCTGCCACTAA-GCAGCCGCAATTGTCATCATGCTTTCTACTGA 76450
Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGA----TGCTCTTAAAGAAACTGCTCTT 110591
|| || ||||| ||||| ||||||| | | ||| | | || ||| |
Sbjct 76451 CCATGGTGGACGATTCCATTGATGGTATTT-TCACATCTGCACATCAATG---TGCATTG 76506
Query 110592 ATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGA--- 110648
||||| ||| |||| || |||||| | |||| ||| || || |||||||
Sbjct 76507 ATTTCCAAATCTGCTGGCGGTATTGGTCTGAACGTACATTGCATACGTGCAAAAGGCACT 76566
Query 110649 GCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTC 110708
|||| | | | ||| || | | |||| ||| | || || ||||| |||| |||
Sbjct 76567 GCAATTGTGGGTACA---AATAGCACATCAAATGGTTTGGTGCCTATGTTGCGAGTGTTC 76623
Query 110709 AACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATC 110765
|| | | ||| |||||| |||||||||| ||| || ||| | ||||| |||
Sbjct 76624 AATAATATAGCACGCTATGTGGATCAAGGTGGCGGTAAACGACCAGGCGCCTTTGCCATC 76683
Query 110766 TATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAA-GG 110824
|| || ||||| |||||| | ||||| || ||||| || ||| || ||||| || ||
Sbjct 76684 TACCTGGAACCATGGCATGCTGATATTTTCGAATTTTTGGAA-TTGAAAAAAAACACTGG 76742
Query 110825 ATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCAT 110884
||||| || | || | ||||| || ||||| | ||||| | ||| |||| ||
Sbjct 76743 CAAAGAAGAGCATCGCGCCAGAGATTTGTTCTATGCCTTATGGATACCTGATCTATTTAT 76802
Query 110885 GAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCT 110944
||||||||| ||| ||| ||||| || |||||||| || | ||| ||| |
Sbjct 76803 GAAACGTGTAGAAGCCGATGAAGACTGGTCGCTAATGTGTCCACACAAGTGTCCCGGTTT 76862
Query 110945 ATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAA 111004
| ||| |||| || ||||||| ||| | | || ||||||||| | ||||| |
Sbjct 76863 ACATGAAGTATGGGGTGAAGAGTTCGAAAAGTTATATCTGAAATATGAACAGGAAGG-AC 76921
Query 111005 GTTTCGCAAACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTG 111063
|| | || ||| | | || ||| |||||||| | || ||||||| ||||| |
Sbjct 76922 GTGCCAATAAGAAAATAAAAGCACAAAGTCTTTGGTTTAGCATTATTGAATCGCAAGTGG 76981
Query 111064 AAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGA 111123
| || || || || || || |||||||||||| | |||||| || ||||||| ||
Sbjct 76982 AGACCGGCACACCATACATGTTGTATAAAGATGCTTGTAATCGAAAGAGTAATCAACAGA 77041
Query 111124 ATTTAGGAACAATTAAGTCTAGTAATTTGTG 111154
|| | || |||||||||| ||||||||| ||
Sbjct 77042 ATGTTGGCACAATTAAGTGTAGTAATTTATG 77072
>seq1198
Length=84828
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389
|| || |||||| | ||||||||||| ||||||||||| || ||| ||| ||| |||
Sbjct 57634 GTGCTTTTCAATCGCCAACCATCACTACATAAAATGTCGATTATGTGTCACCAAGCTAAA 57575
Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGAT 305449
|| | | |||||||| || || | ||||||||||||| ||||| || |||
Sbjct 57574 GTGCAGCCACAACGTACATTTCGTTTTAACGAGTGTGCTTGTACGCCATATAACGCAGAT 57515
Query 305450 TTTGATGGAGATGAAATGAAT 305470
|| || || ||||||||||||
Sbjct 57514 TTCGACGGCGATGAAATGAAT 57494
>seq312
Length=186961
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/185 (72%), Gaps = 6/185 (3%)
Strand=Plus/Plus
Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365
|||||||| ||| ||||| |||| | |||||| | || ||| || | |||||||||
Sbjct 165265 AGACATTTACGCGACGATGATCTGGTTATTTTCAATCGTCAGCCAACATTACATAAAATG 165324
Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGT 305425
|||||||| ||| ||||| ||||| || | | ||||| || | ||| | ||
Sbjct 165325 AGTATGATGGGGCATCGTGTCAAGGTATTGCCTTGGTCTACATTCCGTATGAATTT--GT 165382
Query 305426 GCTTGTACG---CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCT 305482
|| |||| || ||||| || ||||| || |||||||||||||| |||| || ||
Sbjct 165383 CCT-GTACTTCACCATATAACGCTGATTTCGACGGAGATGAAATGAACTTGCACGTGCCG 165441
Query 305483 CAATC 305487
|||||
Sbjct 165442 CAATC 165446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186326814993560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |