Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_025441.1 Length=66854 Score E Sequences producing significant alignments: (Bits) Value seq2983 140 1e-28 >seq2983 Length=44036 Score = 140 bits (154), Expect = 1e-28 Identities = 307/452 (68%), Gaps = 10/452 (2%) Strand=Plus/Plus Query 23546 AACCACGCCATCAATCCCGACCCCGCTGCAGTTCCTGCAACAGTGGCTGCCTGGCTTCGT 23605 ||||| || || ||| |||| ||| | |||||| | || | ||||| || |||||||| Sbjct 13961 AACCAACCCGTCTATCGCGACGCCGATCCAGTTCTTACAGGAATGGCTCCCGGGCTTCGT 14020 Query 23606 CAAAATCATGACCGCTGCCCGTAAAATTGACGAGCTGGTTGGTATTGACACCGTTGGTCA 23665 |||| |||| || |||||||| |||| || || || | | ||| | || Sbjct 14021 GCGCTTCATTACCGGTGTACGTAAAATCGACGCCCTTGTCGGCCTGGCGACCATCGGATC 14080 Query 23666 GTGGGAAGATGCAGAAATCGTTCAGGGCATCGTTGAACCAGCTGG-CACCGCAGTTGAAT 23724 ||||||||| | |||| |||| ||||| || || | | ||||| | ||| | | Sbjct 14081 GTGGGAAGACGAAGAAGTCGTACAGGGT-TCTATGGAACTGCTGGGCGGCGCGCTGCCGT 14139 Query 23725 ATGGTGATTTCACCTCTATTCCTCTGGCAAGCTGGAACGTGAACTTTGAACGCCGTTCCA 23784 | |||| | |||||| ||| | |||||||||| |||| |||| | ||| | Sbjct 14140 ACTCCGATTATGGCAATATTCCGCTGACCAGCTGGAACGCTAACTATGAAGGTCGTACGG 14199 Query 23785 TCGTTCGCGGTGAAATGGGCATGGCAGTCGGCATGCTGGAAGAAGGCCGCGC-GTCTGCG 23843 |||| ||| || ||||| | || || |||||||||||| |||| | | | | | Sbjct 14200 TCGTACGCTTCGAGCTGGGCTTTAACGTTGGTCTGCTGGAAGAAGCCCGCACCGCCCGTG 14259 Query 23844 ATGCGTCTGAACTCTGCA---GAGACCAAGCGCCAGCAGGCTGCTGTATCTCTGGAAATC 23900 ||| | || || || |||| |||| ||| | ||| ||||||||| Sbjct 14260 C-GCGCATCAATTCCGCGTCCGAGAAGC-GCGCGAGC--GTCACTGAGCAGCTGGAAATC 14315 Query 23901 ATGCGTAACGCAATCGGCTTCTATGGTTGGTATAACGGGAACAACCGCACGTTCGGCTTC 23960 ||||||| ||||||||| ||||| | | ||||| | |||||| ||||| |||||| Sbjct 14316 CGCCGTAACGAAATCGGCTTTTATGGCTTTAACAACGGTACCAACCGTACGTTTGGCTTC 14375 Query 23961 CTGAATGATCCAAACCTGCCAGCGGCAATGAC 23992 ||||| ||||||||||||| | | ||||| || Sbjct 14376 CTGAACGATCCAAACCTGCTACCAGCAATCAC 14407 Score = 95.1 bits (104), Expect = 5e-15 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 24326 CGATGATGGTTCCGTATTCAGTCAGCTGGTCCAGACTAAGTTTATGACTCTGGGCGTTGA 24385 ||| || ||| ||||| | |||||||||| | |||||||||||| ||||||||| || Sbjct 14735 CGACGACGGTAAGGTATTTATCCAGCTGGTCCCGGCTAAGTTTATGAGTCTGGGCGTGGA 14794 Query 24386 GAAACGCGCTAAGAGCTACGTTGAAGACTACGCAAACGCAACAGCAGGCGTTCTGCTCAA 24445 || |||| ||| |||| ||||||| |||||||| || || ||| | |||| || Sbjct 14795 TAAGGGCGCGAAGTCCTACACCGAAGACTTTGCAAACGCCACTGCGGGCTGTATGCTTAA 14854 Query 24446 GCGTCCTTTCGCAGTCGTCCGT 24467 || |||| ||| || || ||| Sbjct 14855 ACGGCCTTACGCGGTTGTACGT 14876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 213724719111400