Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq609 127 2e-24
seq749 113 4e-20
seq2732 102 8e-17
>seq609
Length=128410
Score = 127 bits (140), Expect = 2e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| ||||||||| | | ||||||| ||||| |||||||||||| || |||||| |
Sbjct 92958 CGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCA 92899
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | ||||| |||| |||| | ||||||||||||||| || || || |||||
Sbjct 92898 TCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTG 92839
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||||| ||| | | ||| | || || | ||||| || || | || |
Sbjct 92838 TCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATG 92779
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| |||||||| | ||||| | ||||||||||||
Sbjct 92778 GTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744
>seq749
Length=113903
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | || || ||||| |||||||| ||| || ||||||
Sbjct 496 CGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCG 555
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | || ||||||| |||||| ||| |||||||||||||| || || || ||
Sbjct 556 TCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTG 615
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||||||| ||| | | ||| | ||||||| || || || || | || |
Sbjct 616 TCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATT 675
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||||| |||| |||||| | ||| || |||||
Sbjct 676 GTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710
Score = 109 bits (120), Expect = 5e-19
Identities = 158/223 (71%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| ||||| | ||| ||||||| | || || |||||||| || |||||| || ||
Sbjct 717 ACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGT 776
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| || | |||||| || | | || | ||| ||||||||||| || || ||
Sbjct 777 GCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCC 836
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| ||||| |||||| ||| | | || | ||||||| ||||| || || |
Sbjct 837 TTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAA 896
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | ||||| || |||| |||||| | |||||||||||||
Sbjct 897 AGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 939
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||||||||| | | ||||| || || |||||||| ||| || || || |||||
Sbjct 957 AACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTC 1016
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
|| |||||||||| | |||||| ||| ||||||||||| || || |||||||| ||
Sbjct 1017 CAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTG 1076
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
||| || ||| | | ||| | |||||||| || || || || | || | || ||
Sbjct 1077 AATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTT 1136
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| || || | ||| || |||||
Sbjct 1137 GCCAGTCAAGGTCTTCACGAAGATTTGCAT 1166
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | ||||||||||| |||||||| ||| || ||||||
Sbjct 40 CGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGTACGTCCG 99
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| || | ||||| |||| |||| | ||| || |||||||| || |||||||| |||
Sbjct 100 TCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTA 159
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || || | | || | ||||| | || || || || | || |
Sbjct 160 TCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATG 219
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| ||||| || || || | ||| || |||||
Sbjct 220 GTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254
>seq2732
Length=47336
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| ||||| || ||||| || || || |||||| | || || |||| |
Sbjct 1639 GACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCCAATTGCTTTCCGGCA 1698
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| ||||||||||||||||| || || || ||||| ||||| |||||| || |
Sbjct 1699 AAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACA 1758
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
||||| | |||||| | ||||| || || | || | || ||||| || || ||||||
Sbjct 1759 TGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTT 1818
Query 132110 ATGAAAATCTGCAT 132123
| ||| || |||||
Sbjct 1819 ACGAATATTTGCAT 1832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476420793825600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |