Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq609 127 2e-24 seq749 113 4e-20 seq2732 102 8e-17 >seq609 Length=128410 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||||||| | | ||||||| ||||| |||||||||||| || |||||| | Sbjct 92958 CGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCA 92899 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||||| |||| |||| | ||||||||||||||| || || || ||||| Sbjct 92898 TCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTG 92839 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| ||| | | ||| | || || | ||||| || || | || | Sbjct 92838 TCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATG 92779 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||| | ||||| | |||||||||||| Sbjct 92778 GTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744 >seq749 Length=113903 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | || || ||||| |||||||| ||| || |||||| Sbjct 496 CGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCG 555 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | || ||||||| |||||| ||| |||||||||||||| || || || || Sbjct 556 TCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTG 615 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||||| ||| | | ||| | ||||||| || || || || | || | Sbjct 616 TCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATT 675 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| |||| |||||| | ||| || ||||| Sbjct 676 GTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710 Score = 109 bits (120), Expect = 5e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| ||||| | ||| ||||||| | || || |||||||| || |||||| || || Sbjct 717 ACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGT 776 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| || | |||||| || | | || | ||| ||||||||||| || || || Sbjct 777 GCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCC 836 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| ||||| |||||| ||| | | || | ||||||| ||||| || || | Sbjct 837 TTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAA 896 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | ||||| || |||| |||||| | ||||||||||||| Sbjct 897 AGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 939 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | ||||| || || |||||||| ||| || || || ||||| Sbjct 957 AACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTC 1016 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || |||||||||| | |||||| ||| ||||||||||| || || |||||||| || Sbjct 1017 CAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTG 1076 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || ||| | | ||| | |||||||| || || || || | || | || || Sbjct 1077 AATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTT 1136 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || || | ||| || ||||| Sbjct 1137 GCCAGTCAAGGTCTTCACGAAGATTTGCAT 1166 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||||||||| |||||||| ||| || |||||| Sbjct 40 CGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGTACGTCCG 99 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || | ||||| |||| |||| | ||| || |||||||| || |||||||| ||| Sbjct 100 TCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTA 159 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | ||||| | || || || || | || | Sbjct 160 TCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATG 219 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || || || | ||| || ||||| Sbjct 220 GTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254 >seq2732 Length=47336 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| ||||| || ||||| || || || |||||| | || || |||| | Sbjct 1639 GACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCCAATTGCTTTCCGGCA 1698 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | ||||||||||||||||| || || || ||||| ||||| |||||| || | Sbjct 1699 AAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACA 1758 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 ||||| | |||||| | ||||| || || | || | || ||||| || || |||||| Sbjct 1759 TGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTT 1818 Query 132110 ATGAAAATCTGCAT 132123 | ||| || ||||| Sbjct 1819 ACGAATATTTGCAT 1832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476420793825600