Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_026600.1 Length=66181 Score E Sequences producing significant alignments: (Bits) Value seq2983 102 3e-17 >seq2983 Length=44036 Score = 102 bits (112), Expect = 3e-17 Identities = 293/444 (66%), Gaps = 19/444 (4%) Strand=Plus/Plus Query 22627 ACCACGCCGTCCATCCCGACCCCCATCCAGTTCCTTCAGACCTGGTTGCCTGGGTTCGTG 22686 |||| ||||| ||| |||| || ||||||||| | ||| ||| | || || |||||| Sbjct 13962 ACCAACCCGTCTATCGCGACGCCGATCCAGTTCTTACAGGAATGGCTCCCGGGCTTCGTG 14021 Query 22687 AAGGTCATGACCGCCGCGCGGAAAATCGATGAGATCATCGGCATCGACACCGTTGGCTCC 22746 |||| |||| | || |||||||| | | ||||| | | ||| | || || Sbjct 14022 CGCTTCATTACCGGTGTACGTAAAATCGACGCCCTTGTCGGCCTGGCGACCATCGGATCG 14081 Query 22747 TGGGAAGACCAGGAAATCGTTCAGGGTATCGTTGA---GCCGGCCGGCACTGCGGTGGAA 22803 ||||||||| | ||| |||| |||||| | || || || |||| ||| || Sbjct 14082 TGGGAAGACGAAGAAGTCGTACAGGGTTCTATGGAACTGCTGGGCGGC---GCGCTGCCG 14138 Query 22804 TACGGTGACCACACCAACATCCCGCTGACCAGCTGGAACGCCAACTTCGAGCGCCGCACC 22863 ||| || | ||| || |||||||||||||||||||| |||| || | || || Sbjct 14139 TACTCCGATTATGGCAATATTCCGCTGACCAGCTGGAACGCTAACTATGAAGGTCGTACG 14198 Query 22864 ATCGTTCGTGGTGAGCTGGGTCTGCTCGTGGGTACTCTGGAAGAGGGCCGCGCTTCGGCC 22923 |||| || |||||||| | ||| ||| |||||||| | |||| | || || Sbjct 14199 GTCGTACGCTTCGAGCTGGGCTTTAACGTTGGTCTGCTGGAAGAAGCCCGCAC--CGCCC 14256 Query 22924 ATTCGACTGAACAGCGCAGAGACC---AAGCGTCAGCAGGCGGCCATCGG--TCTGGAAA 22978 | || | | || | | | || ||||| || ||| | | | ||||||| Sbjct 14257 GTGCG-CGCATCAATTCCGCGTCCGAGAAGCG--CGCGAGCGTCACTGAGCAGCTGGAAA 14313 Query 22979 TCTTCCGCAACGCCATCGGTTTTTACGGCTGGCAGAGCGGCCTTGGCAACCGCACCTATG 23038 || ||| |||| ||||| ||||| |||| | | ||| | |||||| || | || Sbjct 14314 TCCGCCGTAACGAAATCGGCTTTTATGGCTTTAACAACGG---TACCAACCGTACGTTTG 14370 Query 23039 GTTTCCTGAATGACCCCAACCTGC 23062 | |||||||| || || ||||||| Sbjct 14371 GCTTCCTGAACGATCCAAACCTGC 14394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211571957965520