Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq127 100 4e-16 >seq127 Length=321973 Score = 100 bits (110), Expect = 4e-16 Identities = 250/376 (66%), Gaps = 4/376 (1%) Strand=Plus/Minus Query 161417 TATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGT 161476 || || | ||||||||| | ||||| | || ||| ||| | ||| ||| ||| Sbjct 250562 TACGGCTTTTGGATTGTTATTAACTATCGTGAAGCATATAATATGTATGCCTGTAATGGC 250503 Query 161477 ATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACT 161536 || | ||||| || || || ||||| || ||||| | |||||| || || || || || Sbjct 250502 ATATTGTTCAATCACGAATCCCCACGTCGTGGTGAAAATTTCGTGACACGCAAAATAAC- 250444 Query 161537 AGGGGACTATCCCGTAT-TAGTACAGGA-CTACAGGATTGTCTATACCTAGGTAATCTAA 161594 | | | | || | || | || | | | ||| | | | | | |||||||| Sbjct 250443 -GCGTTCCGTAGCGAAAATATTTCATCAACAATTGGAATCTTTCGAATTGGGTAATCTTG 250385 Query 161595 ACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTAC 161654 |||| | ||| ||||||||||| || || || |||||||| |||||| ||||||| | Sbjct 250384 ACTCGAAACGTGATTGGGGTCACGCAATGGATTACGTGGAGGCCATGTGGATGATGTTGC 250325 Query 161655 AACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGTGAAGGACT 161714 || ||||| |||| ||| | |||||||||||| ||| || | | || || | Sbjct 250324 AATTGGAAAAGCCTGCTGATTTTGTGATTGCCACCGGTGAAACGCACAGCGTTCGTGAAT 250265 Query 161715 TTGTAGAGGCATCTGCTGAATACTTTGGTATGAAGATTGAGTGGCAGGGTGAAGGATTGG 161774 |||| || | ||| ||| | |||| | || | ||||| || || ||| | | Sbjct 250264 TTGTCGAAGAGTCTTTCAAATTCATTGGCCGAGAAATAGTTTGGCAAGGCGAGGGAGTTG 250205 Query 161775 ATGAAGTGGGTATAGA 161790 ||||||||||||| || Sbjct 250204 ATGAAGTGGGTATCGA 250189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729637993124800