Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq291 554 6e-153 seq225 264 2e-65 >seq291 Length=196152 Score = 554 bits (614), Expect = 6e-153 Identities = 1247/1852 (67%), Gaps = 29/1852 (2%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || ||||| ||||| | ||| ||||| || || || |||||| |||| ||||||||| Sbjct 78018 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 77959 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || ||| || || || ||| | || || || | || || || | ||| ||||| Sbjct 77958 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 77899 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGG--AATTT 68572 ||||||||||| || || | |||||| |||||||| || | |||| | | ||| | Sbjct 77898 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGA--TGTTTTCACGGAAATCT 77841 Query 68573 CCCAAATAGTCTT--AAAAATC---TGTTTGATATCATCTGGAAGGCTCG-TATTTTGAA 68626 |||||| ||| || | | ||| | | || | | | |||| || ||||||| | Sbjct 77840 CCCAAACAGTTTTGTATAGATCGCGTATGTGCTGTGGTATGGAT---TCAATATTTTGTA 77784 Query 68627 TGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCT-CTCC 68685 ||||||| | | || |||||| ||||||| || ||||||| ||||| | ||| Sbjct 77783 TGGATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCG 77724 Query 68686 GTTAAAACTC-TAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACG 68744 |||| | | | ||| || || |||| || | ||||||||| || || | ||| | ||| Sbjct 77723 GTTAGATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACG 77665 Query 68745 AGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGT 68804 || |||||||| || || ||||| | || ||||| || |||| |||||| || || Sbjct 77664 TGTATAAATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGT 77605 Query 68805 TGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTT 68864 ||| ||||||||||| || || | || ||| || | | ||||||| | ||||| Sbjct 77604 TGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACCATGTTGCTTTATTTT 77545 Query 68865 ATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTG 68924 || || | | |||||| ||||||||||| |||| || ||| | || || || Sbjct 77544 CTCCTTCAATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTG 77485 Query 68925 TAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGC 68984 |||||| || ||||| | ||| || ||||| |||||||| | || | | |||||| Sbjct 77484 TAGAATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAGC 77425 Query 68985 TAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAG 69044 || ||| ||||| || || || || || || ||||| |||||||| || | || ||| | Sbjct 77424 TAATTCGCAACTGGCTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCAA 77365 Query 69045 ATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCC 69104 | ||||||| ||| ||| |||| ||| | | ||||| || || || || || || Sbjct 77364 ACGGAATGCTTCTTCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACC 77305 Query 69105 CTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTC--AGCTTCTGGAATA 69162 || | |||||||| || || | |||||| ||| || |||| || || || | Sbjct 77304 TTGTATGCCAATACCAATGGGACGATGTCTGAAATTCGA--TTTCCTTGCCTCCGGCAAG 77247 Query 69163 GGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCC 69222 ||||||| |||||| ||||| |||||||| ||||| || || || || || Sbjct 77246 GGATAATGATTAATGTCTATGATTTTATTCAGATTACGTGTAACGGTCTTTGTGACTTCT 77187 Query 69223 TTTAGTTTGAGAAAATCAAA--TCGTC-CATCTATAACAAACATATTCAGTGCTACAGAT 69279 || || ||| ||| | | || | | | ||||||||||||| || | || Sbjct 77186 TTGAGGCGCTTAAAGTCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCGAA 77127 Query 69280 GCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGA 69339 || | || || || |||||||||| | | ||||| | || || ||||||| | Sbjct 77126 GCCAAGTTGCACACAGCTACCTCATCGGGTGACGAATATTCCACAATTTCGGTACATAAA 77067 Query 69340 TTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTG 69399 |||||||| || || || || | ||| || |||||||||||| ||||| || || || Sbjct 77066 TTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTA 77007 Query 69400 TAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACC 69459 || | || | || || || || || | || ||||| ||||| | | | || ||| Sbjct 77006 TACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGACT 76948 Query 69460 CT-AGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTC 69518 | || |||||| | ||| ||| || | |||||||| ||||| | ||| Sbjct 76947 TTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGTTCATATTTCAGATATAACTTTTC 76888 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 ||| || || ||||| || |||| || || ||||| | | ||||||||| | ||||| Sbjct 76887 GAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGACCA 76828 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGA 69637 | ||||| | | || ||||||||||||||||| || ||||| | || ||| || | Sbjct 76827 GTCTTCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATA-AGGCATAGAACA 76769 Query 69638 GATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAA 69697 |||||||| | || ||||| || || || |||||||| | || | ||| || | || Sbjct 76768 AATCTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTCGAAAA 76709 Query 69698 TATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCT 69757 |||||| |||||||||||| || || || || | | | || ||||||||| || || | Sbjct 76708 TATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTT 76649 Query 69758 GATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATT 69817 |||| | || | || | ||||| | |||| || ||| || | | |||||| ||| Sbjct 76648 GATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCATTTGATG 76589 Query 69818 TACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTA 69877 | | |||||| || ||| | | ||| |||| || || | | ||||| | Sbjct 76588 TGCTATTTGTACCCACAATTGCAGTGCCTTTTGCACGTATGCAATGTACGTTCAGACCAA 76529 Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACG-TTTCAATGTGTCATATATACCCTCT 69936 | || || || ||| || || | ||||| | | | | ||| | | ||||| || Sbjct 76528 TACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGTGA-AAATACCATCA 76470 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 ||| ||| || | |||| | || ||||| || |||| ||| | || |||| | Sbjct 76469 ATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTGCTTAGTGGCA 76410 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 ||| || | || ||||| || || || || | ||| ||||||| ||||| ||| Sbjct 76409 GCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAAAGCAAGTTGTAAGTT 76350 Query 70057 TCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116 || || |||| || || || ||| || || || || |||||||| ||||||||| Sbjct 76349 TCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACACGCATTAACATATGC 76290 Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176 || ||||| || || |||| || | ||| | || || || ||| || |||||| Sbjct 76289 TGTGGTCGCTCAACAATTTTGCCGTTCAATTTTAGCAAATAGGAACGTTCAAGCGTTTTA 76230 Query 70177 AACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228 || |||||||| || || ||| || | | |||||||| |||| |||| Sbjct 76229 AAACCAAAATAATTATAACCAAAATCGCGGGCATAAATAATGGCAGAGTTTA 76178 Score = 111 bits (122), Expect = 2e-19 Identities = 201/288 (70%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || ||||| ||||| | ||| ||||| || || || |||||| |||| ||||||||| Sbjct 85094 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 85035 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || ||| || || || ||| | || || || | || || || | ||| ||||| Sbjct 85034 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 84975 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGA--GGAATTT 68572 ||||||||||| || || | |||||| |||||||| || | |||| | | ||| | Sbjct 84974 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGAT--CGATGTTTTCACGGAAATCT 84917 Query 68573 CCCAAATAGTCT--TAAAAATCTGTTTGATATCATCTGGAAGGC--TC-GTATTTTGAAT 68627 |||||| || | || | ||| | || | | ||| | || || ||||||| || Sbjct 84916 CCCAAACTGTTTTGTATAGATCGCGT--ATGTGCTGTGGTATGCATTCAATATTTTGTAT 84859 Query 68628 GGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAA 68675 |||||| | | || |||||| ||||||| || ||||||| |||||| Sbjct 84858 GGATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAA 84811 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 70338 AAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGC 70397 ||||| |||||| ||||| || || ||||||||||| ||||| | || || | | || Sbjct 75966 AAATACTTTTTTAGTTTCTTTATGCAAATTTGATATAGCTATGCGAGCAGCCAACGTTGC 75907 Query 70398 ATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATC 70451 |||||| | ||||||||| ||| | | || |||||||| ||||| || |||| Sbjct 75906 ATAGTCGGCATGTTGTGTTGTAAGACTTGCCGCTATTTCAGCAGCCAAGTTATC 75853 >seq225 Length=233467 Score = 264 bits (292), Expect = 2e-65 Identities = 489/715 (68%), Gaps = 13/715 (2%) Strand=Plus/Minus Query 39442 AATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTAT 39501 || ||| | ||| || |||||||| || || ||| | || |||||||| || || Sbjct 26888 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 26829 Query 39502 GAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT 39561 | || || || | ||| || |||| || || | || || | || || || | || Sbjct 26828 TAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 26769 Query 39562 TATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621 ||| | | ||||| ||| ||| || | |||||||| ||||| || || || Sbjct 26768 TATTTCAACAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGC 26709 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 |||||||||||| || |||||||||| ||||| ||| || |||||||| | || || Sbjct 26708 GAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGG 26649 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741 ||||| |||||| || || ||||| || || | ||||||| ||| ||||| || || Sbjct 26648 CATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACC 26589 Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT----ATCC 39797 ||| || || |||||||||| | | || || || ||| | | | |||| Sbjct 26588 TTCAACGGCAGCAAATGCAATTACACGTTCACCA-AAGTTGGCCGACTTCGAGGAAATCC 26530 Query 39798 ACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 39857 | | |||||||| || || |||||| ||||||||| ||||||||||| || | Sbjct 26529 AAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATA 26470 Query 39858 GATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTG 39917 |||| ||| | || |||| ||||||||| ||||| | ||||||||||| | Sbjct 26469 AGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAG 26410 Query 39918 AATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTA 39977 |||| | || || ||||| || |||||||| || || || | ||| || || | ||| | Sbjct 26409 AATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGA 26350 Query 39978 CCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAA 40037 | || || || | ||| | | |||||||||||| || |||||| ||||| |||| Sbjct 26349 CTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAA 26290 Query 40038 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATT----TATTCCAGTCA 40093 | || || || ||| |||||||| | ||||| | ||| || ||| ||| Sbjct 26289 AGGCTAACACGTGTGAAATAAAATGTCGTTCAT----TATCAGTTAGACGTGCCCAATCA 26234 Query 40094 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 | |||||||| || | ||||||||| | ||||||| ||||| || ||||||| Sbjct 26233 TCCATATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGCCT 26179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686634379934400