Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq157 118 1e-21 >seq157 Length=290505 Score = 118 bits (130), Expect = 1e-21 Identities = 183/254 (72%), Gaps = 8/254 (3%) Strand=Plus/Minus Query 31154 CTTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTC 31213 |||| || ||||| ||| | ||| |||||||| | || ||| || || |||||||||| Sbjct 145048 CTTCAATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACAAAATCCCCTGGTC 144989 Query 31214 TTAGATGGGTCAATTTG-GCAATCACAT--GAACCAAAAGCGCATAACTCGCTATGTTGA 31270 |||| || ||| || ||||||| || | | |||||| | | || || || | Sbjct 144988 GGAGATCAGT-AATATGAGCAATCATATAGGTAAGCAAAGCGTACGAG--GCAATATTAA 144932 Query 31271 ATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTC 31330 |||||||||||||||||| ||||||| ||||| ||||| ||| || | ||| | Sbjct 144931 ATGGTACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAATTCTCCAT 144872 Query 31331 CGGTCACGTAAAATTG-AAATAACACATGACAAGGCGGCAAAGCCATTTCACAGGTATCG 31389 || || ||||||| | ||| ||||||||| || | |||||||| | | ||||| Sbjct 144871 TGGCAACAAAAAATTGTGCAAGACA-ATGACAAGGTGGTAGAGCCATTTGAGGGATATCG 144813 Query 31390 ACGGGATTCCAAGC 31403 || ||||||||||| Sbjct 144812 ACAGGATTCCAAGC 144799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512812649468800