Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq291 306 3e-78 seq749 127 2e-24 seq2732 109 5e-19 seq1128 102 7e-17 seq609 86.0 5e-12 >seq291 Length=196152 Score = 306 bits (338), Expect = 3e-78 Identities = 1030/1579 (65%), Gaps = 50/1579 (3%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || || ||||| || ||||| | || || || || ||||||||||||||||| Sbjct 78048 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 77989 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGG--TAATTGG 130523 || ||||| || || || || || || | | | || || |||| Sbjct 77988 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATA--GAAGTGAGCTTACCATAGTTGG 77931 Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583 | | |||||| |||||||| ||| || ||||| || || || || | ||||||| Sbjct 77930 GCTCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAG 77871 Query 130584 CCATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGT 130643 |||| | || | ||||| ||||||||| | || ||||||||||| | |||| Sbjct 77870 CCATTTTGATCGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGT 77811 Query 130644 GTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCA 130703 | | |||||| |||| ||| | | ||| ||| |||||| | || || Sbjct 77810 GCTGTGGTATGGATTCAATATTTTGTATGGATCCGCGACTGGTTATAATATTATTCTTCA 77751 Query 130704 TACTTTTATCGTACA--ATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGAT 130761 || | ||| ||| | |||| || ||||| || ||| |||| ||| | | Sbjct 77750 TATCATCATCCCACAGNACCCAA-CTCGGTTAGATCGCGTAACAAGTGATGATTTACAAC 77692 Query 130762 TTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGA 130821 |||||| ||||| | || || || | ||||| ||| ||| |||||||||| || Sbjct 77691 TTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAAGTGTACGGTTCAAATGA 77632 Query 130822 TTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGA 130881 || |||||||| | ||||||||||| | || || |||||| || | | | ||| Sbjct 77631 CTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGA 77572 Query 130882 ATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGT 130941 || || | ||| || | | ||||| ||||||||| ||||| ||| ||| || Sbjct 77571 GTTGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGT 77512 Query 130942 AGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA--T 130999 ||| | || | |||||| ||| | ||||| || || ||||| |||| || | | Sbjct 77511 TGGTGTT---TTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGG--TGAACCT 77457 Query 131000 TCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCG 131059 | ||| ||| ||| | || | | ||| | ||| || |||||||| || || Sbjct 77456 TTATACGTTTCATAGGTGCCATAGTTTTCAGCTAATTCGCAACTGGCTTCCAAGGCGCCA 77397 Query 131060 TAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGA 131119 || ||||| |||||| ||||| | ||| || | |||| | || ||||| || Sbjct 77396 TAGTAAATAGTTTCGAATATTTGCTGATTCAAACGGAATGCTTCTTCACTTTCGTATGGG 77337 Query 131120 AATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGT 131179 | ||||| ||| |||||||| || | ||| ||||| |||| || | || | |||| Sbjct 77336 TAACGCATTAGAATTAAAGCGTCGGCAAAACCTTGTATGCCAATACCAATGGGACGATGT 77277 Query 131180 TTTAAATTACATTTACGCGAACATTCGGT--GGGATAAAGGTTAATGTCAATTATTTTGT 131237 | ||||| |||| | | | | ||| ||||||| | |||||||| || ||||| | Sbjct 77276 CTGAAATTCGATTTCCTTG--CCTCCGGCAAGGGATAATGATTAATGTCTATGATTTTAT 77219 Query 131238 TTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAG 131297 | | ||| || || | | |||||| ||| | | || ||| |||| Sbjct 77218 TCAGATTACGTGTAACGGTCTTTGTGACTTCTTTGAGGCGCTTAAAGTCATACGTTT--- 77162 Query 131298 TTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCGT 131357 | ||| | | ||||| ||| | || || |||| || || || || || | Sbjct 77161 TCTCGGGTGTGACAAACATATTCAAGGCGATCGAAGCCAAGTTGCACACAGCTACCTCAT 77102 Query 131358 CA--TAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAA 131415 | | | || |||| | |||||||||| || |||||||| | ||| || ||||| | Sbjct 77101 CGGGTGA-CG-AATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAAC 77044 Query 131416 ATTTTGTTGATTGCTTTTAGCATTCACATGG-TCCTTGTACATCATGTAGGGCGTGCCCG 131474 ||| |||||||| || || ||| ||| | || || |||| |||||| || ||||| | Sbjct 77043 ATTCTGTTGATTACTCTTTCGATT-ACAAGCATCTTTATACAACATGTATGGTGTGCCGG 76985 Query 131475 TTTCGACTTGAGTTTCAATAATGT--ATCGAAAGAGTTTTCGAGCAGACAATTGATATTT 131532 | || ||||| | |||||||||| | | ||||| ||| | || || || || Sbjct 76984 TCTCCACTTGCGATTCAATAATGCTAAACCAAAGACTTT--GTGCT-----TTTATTTTC 76932 Query 131533 GTATTGGC-CGCGTTT----TTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCC--AA 131585 ||||||| || || ||| || || || ||| |||| || | || || | Sbjct 76931 TTATTGGCACGTCCTTCCTGTTCATATTTCAGATATAACTTTTCGAACTCTTCACCCCAT 76872 Query 131586 ACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTT 131645 || ||| ||| |||||| | | ||||||||||||||||| | | | || Sbjct 76871 ACTTCATGT--AAACCGGGACACTTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTT 76814 Query 131646 CAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTT 131705 | || || |||||||| | ||| || | |||||| || || |||| |||||| || | Sbjct 76813 CTACACGTTTCATAAATAGATCAGGTATCCATAAGGCATAGAACAAATCTCTGGCGCGAT 76754 Query 131706 TCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGG 131765 ||||||| | || | |||||||||| | ||||| || ||||| || |||||||| | Sbjct 76753 GCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTCGAAAATATCAGCATGCCATG 76694 Query 131766 GTTCCAAATACACTGCCATTGCGCCTTTGCGCTTACCG---CCTTGATTAACATGACGAA 131822 |||||| || | || | |||||| || |||||| ||||||| |||| || Sbjct 76693 GTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTTGATCCACATAGCGTG 76634 Query 131823 CCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCT 131882 | || || ||| | || |||||||| ||| ||||||| || | | | ||| || | | Sbjct 76633 CTATATTATTGAACACTCGCAACATAGGCACCAAACCATTTGATGTGCTATTTGTACCCA 76574 Query 131883 TAA-TGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTAT 131941 || || || |||| || || | || || ||||| || |||||||| || | || Sbjct 76573 CAATTGCAG-TGCCTTTTGCACGTATGCAATGTACGTTCAGACCAATACCGCCAGCAGAT 76515 Query 131942 TTAGAGATTAGTGCGCATT 131960 || || || | ||| |||| Sbjct 76514 TTGGAAATCAATGCACATT 76496 >seq749 Length=113903 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||||||||| || | ||||| || ||||| || ||||| ||| | Sbjct 484 CCACCGCGGAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGAC 543 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || ||||||| | || ||||||||| | || | ||| |||||||| || || Sbjct 544 AAGGTACGTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGA 603 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || || || ||| | | |||| | || || | | |||||| Sbjct 604 ATACCCTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACC 663 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | ||| ||||||| |||||| || |||||||||||| Sbjct 664 TCCAGAGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCATA 711 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||||||||| || | ||||| || || || || ||||||||| || |||| || Sbjct 268 CGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGTCCG 327 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || | || ||||||||| | || | ||| |||||||| || || | |||||| ||| Sbjct 328 TCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGAATACCCTCCTTA 387 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | | || | || |||| | |||||||| | ||| || Sbjct 388 TCTTGGATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAAAGTGATG 447 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | |||||| || || || || || |||||||||||| Sbjct 448 GTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCATA 483 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||||| || || || || ||||| ||| || |||| ||||||| Sbjct 958 ACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCC 1017 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||||||||| | || | ||| |||||||| || || | || ||||| || Sbjct 1018 AGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGA 1077 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | |||| | ||| || | | |||||| || ||||| || | ||| Sbjct 1078 ATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTG 1137 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| || ||||| ||||||||||| Sbjct 1138 CCAGTCAAGGTCTTCACGAAGATTTGCAT 1166 Score = 105 bits (116), Expect = 6e-18 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||||||||| || | ||||| |||||||| || ||||| ||| || | | || || Sbjct 40 CGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGTACGTCCG 99 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || | ||||| |||||| | || | ||| || ||||| || || | || || ||| Sbjct 100 TCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTA 159 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| || | | | || | || |||| | |||||| || | || || Sbjct 160 TCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATG 219 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | |||||| || || || ||||| ||||||||||| Sbjct 220 GTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || || || | || ||||||| || || || ||||||||||| |||||| | Sbjct 712 CCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGAC 771 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || | |||||| || ||| |||| | ||| |||||||| || || Sbjct 772 AGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGG 831 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || ||||| || || ||| | | || | || || | | ||||| Sbjct 832 ATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACC 891 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||| || | ||| ||||||| |||||| || || || ||||| Sbjct 892 TCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 938 >seq2732 Length=47336 Score = 109 bits (120), Expect = 5e-19 Identities = 169/238 (71%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTT 27096 ||| ||||| || ||||| ||||| |||||||| ||||| || |||| ||| | |||| Sbjct 1623 TACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGT-GCGACCATCTT 1681 Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156 | | || || ||||| |||| |||||||||||||| ||||| | || || ||||| Sbjct 1682 CCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTT 1741 Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216 || ||| || | ||| | ||| || | | ||||| || ||||| || | | Sbjct 1742 GAATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCT 1801 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAATTTATTAAACCTTAT 27274 | ||||| || ||||| || || |||||||| |||| || ||| | |||||| || Sbjct 1802 TACCCGTAAGGGTTTTTACGAATATTTGCATTGCTG--AACAATCTTACAAACCTAAT 1857 >seq1128 Length=88325 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||||||||| | || | |||||||| | || || || || || |||||||||||| Sbjct 338 GCCTCCGCGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGA 279 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || | || | || || || || || |||||| | || | ||| |||||||| || || Sbjct 278 CAAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGG 219 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| ||||| ||| ||| ||| | | || | || || | | ||||| Sbjct 218 GATTCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAAC 159 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| | || || | |||||| || ||||| ||||| |||||||||||| Sbjct 158 TTCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCACGAAGATTTGCATA 110 >seq609 Length=128410 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||||||| | || || || ||||| || ||||||||| || | | || | Sbjct 92958 CGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCA 92899 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | ||||| |||||| | || | |||||||||||| || || | ||||||||| Sbjct 92898 TCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTG 92839 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| || ||| | |||| | ||||| | | || || |||| || || Sbjct 92838 TCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATG 92779 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || | ||||| || || || ||||| Sbjct 92778 GTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424768882739520