Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2312 93.3 5e-14 >seq2312 Length=53118 Score = 93.3 bits (102), Expect = 5e-14 Identities = 164/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 181806 TCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTG 181865 |||||||||||| ||||| |||||||||||||||| ||||| | | ||||| || Sbjct 32321 TCTTTACCACCCTGCAGACGTGTACCAAATTGACCACGAGGCTCCAATAAATTAATATTA 32380 Query 181866 TTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACACTTCACCG 181925 ||||| || || | | ||||| || || |||||| || || |||| || ||| Sbjct 32381 TTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATCTCGCCG 32440 Query 181926 TGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATCT 181985 || ||||| || ||| | || || ||| | | | ||| || || || |||| ||| | Sbjct 32441 TGATGGTAGGCGGACATTTCAGCCACAGAACCAGACAATTGCGCAACTTTCACCTCACGT 32500 Query 181986 TTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044 ||| ||| | ||| || | | |||| ||||| | || ||||| | |||||| Sbjct 32501 TTGTCGTTACGTTTGAAACAGGTAAACATAACTTTGCGTTGGCCCGGCTTAAAACCATC 32559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627781101216000