Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq291 93.3 5e-14 >seq291 Length=196152 Score = 93.3 bits (102), Expect = 5e-14 Identities = 439/688 (64%), Gaps = 11/688 (2%) Strand=Plus/Plus Query 104915 GAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 104974 ||||| || |||||||||||| | || ||||| || ||||| | ||||||||||||| || Sbjct 76981 GAGACCGGCACACCATACATGTTGTATAAAGATGCTTGTAATCGAAAGAGTAATCAACAG 77040 Query 104975 AATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACA-A 105033 ||| | || || ||| || ||| | ||||| ||||| |||||| | | | || Sbjct 77041 AATGTTGGCACAATTAAGTGTAGTAATTTATGTACCGAAATTGTGGAATATTC-GTCACC 77099 Query 105034 AGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA 105093 |||||| |||||||| ||| | || || ||||| | | || ||| || || Sbjct 77100 CGATGAGGTAGCTGTGTGCAACTTGGCTTCGATCGCCTTGAATATGTTTGTCACACCCGA 77159 Query 105094 GACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCT 105153 | || || | ||| | | | ||| | ||||| || || || || || || || Sbjct 77160 G---AAAACGTATGACTTTAAGCGCCTCAAAGAAGTCACAAAGACCGTTACACGTAATCT 77216 Query 105154 AAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAG 105213 || | | | || || | ||| ||| ||| | | || | ||||| ||| | || Sbjct 77217 GAATAAAATCATAGACATTAATCATTATCCCTTGCCGGAGGCAAGGAAATCGAATTTCAG 77276 Query 105214 ACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCA 105273 ||| ||||| |||||| | || | || ||| | || || | || ||||| || | Sbjct 77277 ACATCGTCCCATTGGTATTGGCATACAAGGTTTTGCCGACGCTTTAATTCTAATGCGTTA 77336 Query 105274 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCA 105333 | ||| || || ||||| | ||| || ||||| || || || || | Sbjct 77337 CCCATACGAAAGTGAAGAAGCATTCCGTTTGAATCAGCAAATATTCGAAACTATTTACTA 77396 Query 105334 CGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 | ||| | || || |||| || || || || |||| | |||||||| | | | Sbjct 77397 TGGCGCCTTGGAAGCCAGTTGCGAATTAGCTGAAAACTATGGCACCTATGAAACGTATAA 77456 Query 105394 GGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 105452 ||||| || | || ||||| | || || | ||| ||||||| | | ||||| | Sbjct 77457 AGGTTCACCCG-TTAGTAAGGGTATTCTACAGTATGACATGTGGG-ATAAAACACCAA-C 77513 Query 105453 T--TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510 | || | | ||| | | ||||| || ||| | | ||| | || ||| Sbjct 77514 TGATCTTTGGAATTGGACCGAATTGAAGGAGAAAATAAAGCAACATGGTGTCCGCAACTC 77573 Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570 | | || | || || |||||||| || || || |||||||| |||| || ||||| | Sbjct 77574 TTTGCTGCTTGCGCCCATGCCAACTGCTTCAACAGCACAAATTATGGGCAACAATGAGTC 77633 Query 105571 CTTTGAACCCTACACGACGAACATCTAT 105598 |||||||| ||||| | || || ||| Sbjct 77634 ATTTGAACCGTACACTTCCAATATTTAT 77661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583027787310400