Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq2983 389 1e-103 >seq2983 Length=44036 Score = 389 bits (430), Expect = 1e-103 Identities = 634/899 (71%), Gaps = 18/899 (2%) Strand=Plus/Plus Query 777 TTCATCATCGACTGGGGCATG-ACGACGGACCCGCGTAATATCGATTATGGCCTGCCGGT 835 || |||| ||| ||||| ||| || || ||||| || || |||| || ||| |||| || Sbjct 7513 TTTATCAACGATTGGGG-ATGCACCACTGACCCACGAAACCTCGACTACGGCTTGCCCGT 7571 Query 836 CACCATCCCTTTTCTGCTATTCCCGAAACAGGAAGAGTGGATTC--ACTGGATTATGGAA 893 |||||||| ||| |||| |||||| ||||| |||| ||| ||||||| | || Sbjct 7572 GACCATCCCGTTTGTGCTCTTCCCGCGCCAGGAGGAGT--ATTGCAACTGGATCGTCGAC 7629 Query 894 CGCTGGGGCAAGCGGGAGAACGGTATCACCGAAAAATCCCGTGAAATGGGGCTGAGCTGG 953 || ||| || || |||||||| || ||| || ||||| |||||||| |||||||| Sbjct 7630 CGATGGAAAAACCGCGAGAACGGCCTCTGCGACAAGTCCCGCGAAATGGGTATGAGCTGG 7689 Query 954 ACG-GCGATCGGGATGGCCTGTTCGCTTTGCCTGTTTAACAAAGAGATGGTCATCGGCTT 1012 ||| ||| | | ||| |||| ||| ||| || | ||| | |||||||| Sbjct 7690 TGTAGCG-TCGCGCTCGCCGTCGCGCTCTGCACGTTCTACCGGCAAATGATAATCGGCTT 7748 Query 1013 TGGTTCCCGTAAAGAGGAATATGTCGACAGTACTGGTGACCCTAAGGCGCTGCTCTGGAA 1072 || || || || ||||||| |||||| || || ||||| || || || ||||||| Sbjct 7749 CGGGTCGCGAAAGCAGGAATACGTCGACTCAACGGGCGACCCGAAAGCCCTATTCTGGAA 7808 Query 1073 GGCGCGCAAGTTTGTGGAGACGCTGCCCGTCGAGTTTCGTGGGTCATGGAATGA--GAAG 1130 | |||| |||| | || | |||||| | |||||||| || | | | | | | Sbjct 7809 AGTGCGCCGGTTTATCGAAATGCTGCCAGCGGAGTTTCGCGGCACGTTCGACGCCCGCCG 7868 Query 1131 AAGCATGCACCGTACATGCGTGTTGAATTTCCTGAGACAGGCGCGGTCATCAAGGGCGAG 1190 | || | |||| ||||| || || || || || | || || | ||||| |||||| Sbjct 7869 A--CACTCGCCGTTTATGCGCGTAGAGTTCCCGGAAAGCGGTTCGATAATCAAAGGCGAG 7926 Query 1191 GCTGGTGACAATATTGGACGTGGTGACCGAACCACACTCTATCTGGTGGATGAGGCTGCA 1250 ||||| |||||||| || || || ||||| | || ||||||||||||||||| | || Sbjct 7927 GCTGGCGACAATATCGGGCGCGGCGACCGTTCAACGCTCTATCTGGTGGATGAATCCGCG 7986 Query 1251 TTTCTGCAACGCCCGCTACTGATTGATGCGGCGTTATCGCAAACCACCCGTTGCCGTATT 1310 || || |||| ||| || || || || | |||| || || ||||| |||||||| Sbjct 7987 TTCCTCGAACGTCCGGAGCTTATCGACGCCTCACTATCCCAGACGACCCGCTGCCGTATC 8046 Query 1311 GACCTGAGTTCGGTCAACGGCATGGCGAACCCGTTTGCGCAGAAACGCCACGGCGGAAAG 1370 || || ||||||||||||||| ||||| || || | |||||| |||||||| Sbjct 8047 GATTTGTCGTCGGTCAACGGCATGAGTAACCCATTCGCCCGGAAACGTTGGGGCGGAAAA 8106 Query 1371 ATACCGGTATTCACATTCCACTGGCGCAGCGACCCCCGTAAGGATGATGAGTGGTATCGC 1430 || || || || ||||||||||| |||||| || || || | | ||||| | Sbjct 8107 ATCAGCGTGTTTACCTTCCACTGGCGAGACGACCCGCGCAAAGACCAGGTATGGTACGAC 8166 Query 1431 AGGGAATGCGAGAAAATCGACAATCCGGTGGTAGTGGCTCAGGAGCTTGACCTGAACTAC 1490 | ||||||||||||||||| || ||||| || || || |||||||| ||||| |||||| Sbjct 8167 AACGAATGCGAGAAAATCGATAACCCGGTCGTCGTCGCGCAGGAGCTGGACCTCAACTAC 8226 Query 1491 AGCGCATCAGCGGAAGGTGTCATGATCCCCTCAGACTGGGTACAGGCTGCTGTTGATGCA 1550 | ||| |||| ||||| | || || ||| || ||| ||||||| ||| | || || Sbjct 8227 AACGCCGCAGCCGAAGGGATTATTATTCCCGGCGAGTGGATACAGGCCGCTATCGACGCC 8286 Query 1551 CATATCAGGCT-GGGCATCCAGCCAACTG--GCAAACGACTGGGCGCGATGGACGTTGCC 1607 |||||| || |||| ||| | | |||| || || | |||||| |||| | ||| Sbjct 8287 CATATCGTCCTGGGGCTTCCCGTC-ACTGGTGCGAAGTTCGGGGCGC--TGGATATCGCC 8343 Query 1608 GACGAAGGTCGGGACAAAAACGCCTTTTCGACCCGTCACGGTTTTCTTCTGGAGAACGT 1666 ||||| || || ||||||||||||||| | || ||||| | || ||||||| ||| Sbjct 8344 GACGAGGGGCGCGACAAAAACGCCTTTGCCGGTCGCCACGGCTGGCTGCTGGAGACCGT 8402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130196968235040