Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_028788.1 Length=37246 Score E Sequences producing significant alignments: (Bits) Value seq20890 118 3e-22 >seq20890 Length=1366 Score = 118 bits (130), Expect = 3e-22 Identities = 357/544 (66%), Gaps = 22/544 (4%) Strand=Plus/Plus Query 21465 ATCTTTCTTGTACCGTATGCTTTCCGATTTTTCTCAAAGATTTCAACGATATGATGGGTT 21524 || |||| || || |||||||||||||||| | ||| || || | || | | Sbjct 833 ATTTTTCGAGTCCCATATGCTTTCCGATTTTGATAAAAAATATCTGCAATCTTTTCTTCA 892 Query 21525 ACATGGTCTTCATTCTGA-CGCTCTTTGGCTTCATAATAGTACGTACTTCTAGAGATTTG 21583 | | | ||||||| | | | ||||| || ||||| || || | ||||||| Sbjct 893 AGTTCGGCTTCATTTTTTTCTGTTTTTGG-TTGGTAATAATAGGTCTGACGAGAGATTCC 951 Query 21584 TAGGACGTCGCACATTGCTGATACCGAGTATTTGTCACGATTACGCTTCATGACATTTAC 21643 ||| | ||||| ||||||| |||||||||| ||| | || || ||| Sbjct 952 TAGACATTTACACATCGCTGATATTGAGTATTTGTGCTTATTGACATCAATTACTTTTCT 1011 Query 21644 TTTCGTCCCATGATCAGCGCTGCTTGCTTTAAAATATCGACTTCCATCTTAAGACGTTGA 21703 |||||||| | |||||||||||||||||||||||||| |||||| | | ||||| Sbjct 1012 TTTCGTCCGAATATCAGCGCTGCTTGCTTTAAAATATCATTTTCCATTTCTAATTGTTGA 1071 Query 21704 TTTTCTTTTCGCAATGCAATAAGTTCATTCTCTTCTAGAGAACGATTATCCTTCTCAGAG 21763 ||| |||||| || |||| || || | ||| |||| | ||||| || || Sbjct 1072 TTTCGTTTTCGTAACTTCTTAAGCTCTTTTTGTTCAAGAGTTAGGTTATCTTTTTCTTTA 1131 Query 21764 AAGGATCCTGACTGATTTGCTTGCTTGATCCAGCGATCCAATGCAGATGCACTCAGTTCA 21823 || || |||| |||| ||| || | ||| ||| || | |||| | |||||| Sbjct 1132 AATGAGCCTGTTGTCTTTGATTGTTTTACCCACTTATCAAAGGTGGATGGCGTTAGTTCA 1191 Query 21824 TACTCATTTATAATGGCTGCTCTTGATTTTCCATTCTCGTGAAGTTGGACCATTTGTCTC 21883 |||| | ||||| ||| ||| | ||||||| | || ||| | || |||||| | Sbjct 1192 TACTGTTGGATAATTTCTGTTCTCGGTTTTCCAGCATTGTAAAGATCAACTATTTGTTGC 1251 Query 21884 TTGAAATCATCTG-TGAAT--GTACGTCTTT---GTCTTGGCATAATAGATCCGTTCCCT 21937 || |||| |||| ||||| || | ||||| || ||| ||| || || ||| Sbjct 1252 TT-AAAT--TCTGTTGAATAGGTTCTTCTTTGACGTTTTGACATGAT-------TTTCCT 1301 Query 21938 ATAA----TAATATGTTATTCTACTAGCCTTAATTTTTCTGTCCAACTTAGTGTAGCCCA 21993 || | | | ||||| ||| ||||| ||||| |||| | |||||||||| | Sbjct 1302 CCAAGGTGTTTTTTATTATTGTACACACCTTATTTTTTTTGTCTAGTCTAGTGTAGCCTA 1361 Query 21994 TCCA 21997 |||| Sbjct 1362 TCCA 1365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119020411628160