Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_028939.1
Length=68871
Score E
Sequences producing significant alignments: (Bits) Value
seq2983 132 2e-26
>seq2983
Length=44036
Score = 132 bits (146), Expect = 2e-26
Identities = 303/445 (68%), Gaps = 21/445 (5%)
Strand=Plus/Plus
Query 17196 ACCACGCCGTCCATCCCGACTCCCATCCAGTTCCTGCAGACCTGGTTGCCGGGCTTCGTG 17255
|||| ||||| ||| |||| || ||||||||| | ||| ||| | ||||||||||||
Sbjct 13962 ACCAACCCGTCTATCGCGACGCCGATCCAGTTCTTACAGGAATGGCTCCCGGGCTTCGTG 14021
Query 17256 AAGGTCATGACCGCTGCACGGAAGATCGACGAAATCATCGGCATCGATACCGTTGGCTCC 17315
|||| |||| || ||| || ||||||| | ||||| | | ||| | || ||
Sbjct 14022 CGCTTCATTACCGGTGTACGTAAAATCGACGCCCTTGTCGGCCTGGCGACCATCGGATCG 14081
Query 17316 TGGGAAGATCAAGAAATCGTCCAGGGCATCGTGGA---GCCGGCCGGCACTGCGGTGGAA 17372
|||||||| ||||| |||| ||||| |||| || || |||| ||| ||
Sbjct 14082 TGGGAAGACGAAGAAGTCGTACAGGGTTCTATGGAACTGCTGGGCGGC---GCGCTGCCG 14138
Query 17373 TACGGCGACCACACCAACATCCCGCTGACCAGCTGGAATGCCAACTTCGAACGTCGCACC 17432
||| ||| | ||| || ||||||||||||||||| || |||| ||| |||| ||
Sbjct 14139 TACTCCGATTATGGCAATATTCCGCTGACCAGCTGGAACGCTAACTATGAAGGTCGTACG 14198
Query 17433 ATCGTTCGTGGCGAGCTGGGTATGATGGTGGGCACCCTGGAAGAGGGTCGTGCCTCGGCC 17492
|||| || ||||||||| | | || || |||||||| | | || || ||
Sbjct 14199 GTCGTACGCTTCGAGCTGGGCTTTAACGTTGGTCTGCTGGAAGAAG--CCCGCACCGCCC 14256
Query 17493 ATCCG-GC-TGAA--CAGCG-CCGAAACCAAACGC-CAACAGGCGGCCATCGGTCTGGAA 17546
| || || | || | ||| |||| || ||| | | | | | | | ||||||
Sbjct 14257 GTGCGCGCATCAATTCCGCGTCCGA---GAAGCGCGCGAGCGTCACTGAGCAG-CTGGAA 14312
Query 17547 ATCTTCCGCAACGCCATCGGCTTTTATGGCTGGCAGAGCGGCCTGGGCAACCGCACCTAT 17606
||| ||| |||| |||||||||||||||| | | ||| |||||| || | |
Sbjct 14313 ATCCGCCGTAACGAAATCGGCTTTTATGGCTTTAACAACGG---TACCAACCGTACGTTT 14369
Query 17607 GGTTTCCTGAACGATCCCAACCTGC 17631
|| |||||||||||||| |||||||
Sbjct 14370 GGCTTCCTGAACGATCCAAACCTGC 14394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 220176605041920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |