Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_028939.1 Length=68871 Score E Sequences producing significant alignments: (Bits) Value seq2983 132 2e-26 >seq2983 Length=44036 Score = 132 bits (146), Expect = 2e-26 Identities = 303/445 (68%), Gaps = 21/445 (5%) Strand=Plus/Plus Query 17196 ACCACGCCGTCCATCCCGACTCCCATCCAGTTCCTGCAGACCTGGTTGCCGGGCTTCGTG 17255 |||| ||||| ||| |||| || ||||||||| | ||| ||| | |||||||||||| Sbjct 13962 ACCAACCCGTCTATCGCGACGCCGATCCAGTTCTTACAGGAATGGCTCCCGGGCTTCGTG 14021 Query 17256 AAGGTCATGACCGCTGCACGGAAGATCGACGAAATCATCGGCATCGATACCGTTGGCTCC 17315 |||| |||| || ||| || ||||||| | ||||| | | ||| | || || Sbjct 14022 CGCTTCATTACCGGTGTACGTAAAATCGACGCCCTTGTCGGCCTGGCGACCATCGGATCG 14081 Query 17316 TGGGAAGATCAAGAAATCGTCCAGGGCATCGTGGA---GCCGGCCGGCACTGCGGTGGAA 17372 |||||||| ||||| |||| ||||| |||| || || |||| ||| || Sbjct 14082 TGGGAAGACGAAGAAGTCGTACAGGGTTCTATGGAACTGCTGGGCGGC---GCGCTGCCG 14138 Query 17373 TACGGCGACCACACCAACATCCCGCTGACCAGCTGGAATGCCAACTTCGAACGTCGCACC 17432 ||| ||| | ||| || ||||||||||||||||| || |||| ||| |||| || Sbjct 14139 TACTCCGATTATGGCAATATTCCGCTGACCAGCTGGAACGCTAACTATGAAGGTCGTACG 14198 Query 17433 ATCGTTCGTGGCGAGCTGGGTATGATGGTGGGCACCCTGGAAGAGGGTCGTGCCTCGGCC 17492 |||| || ||||||||| | | || || |||||||| | | || || || Sbjct 14199 GTCGTACGCTTCGAGCTGGGCTTTAACGTTGGTCTGCTGGAAGAAG--CCCGCACCGCCC 14256 Query 17493 ATCCG-GC-TGAA--CAGCG-CCGAAACCAAACGC-CAACAGGCGGCCATCGGTCTGGAA 17546 | || || | || | ||| |||| || ||| | | | | | | | |||||| Sbjct 14257 GTGCGCGCATCAATTCCGCGTCCGA---GAAGCGCGCGAGCGTCACTGAGCAG-CTGGAA 14312 Query 17547 ATCTTCCGCAACGCCATCGGCTTTTATGGCTGGCAGAGCGGCCTGGGCAACCGCACCTAT 17606 ||| ||| |||| |||||||||||||||| | | ||| |||||| || | | Sbjct 14313 ATCCGCCGTAACGAAATCGGCTTTTATGGCTTTAACAACGG---TACCAACCGTACGTTT 14369 Query 17607 GGTTTCCTGAACGATCCCAACCTGC 17631 || |||||||||||||| ||||||| Sbjct 14370 GGCTTCCTGAACGATCCAAACCTGC 14394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 220176605041920