Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_028971.1 Length=66111 Score E Sequences producing significant alignments: (Bits) Value seq2983 136 2e-27 >seq2983 Length=44036 Score = 136 bits (150), Expect = 2e-27 Identities = 304/445 (68%), Gaps = 21/445 (5%) Strand=Plus/Minus Query 59258 GCAGGTTGGGATCGTTCAGGAAACCATAGGTGCGGTTGCCCAGGCCGCTCTGCCAGCCAT 59317 ||||||| |||||||||||||| ||| | || |||||| ||| | | |||||| Sbjct 14394 GCAGGTTTGGATCGTTCAGGAAGCCAAACGTACGGTTGGTA---CCGTTGTTAAAGCCAT 14338 Query 59318 AAAAGCCGATGGCGTTGCGGAAGATTTCCAGACCGATGGCCGCCTGTTG-GCGTTTGGTT 59376 |||||||||| |||| ||| ||||||||| | | | | | | | ||| || Sbjct 14337 AAAAGCCGATTTCGTTACGGCGGATTTCCAG-CTGCTCAGTGACGCTCGCGCGCTTC--- 14282 Query 59377 TCGG-CGCTG--TTCA-GC-CGGATGGCCGAGGCACGACCCTCTTCCAGGGTGCCCACCA 59431 |||| ||| | || | || || | || || || | | |||||||| || || Sbjct 14281 TCGGACGCGGAATTGATGCGCGCACGGGCGGTGCGGG--CTTCTTCCAGCAGACCAACGT 14224 Query 59432 TCATACCCAGCTCGCCACGAACGATGGTGCGACGTTCGAAGTTGGCGTTCCAGCTGGTCA 59491 | | ||||||||| || |||| || |||| ||| |||| |||||||||||||||| Sbjct 14223 TAAAGCCCAGCTCGAAGCGTACGACCGTACGACCTTCATAGTTAGCGTTCCAGCTGGTCA 14164 Query 59492 GCGGGATGTTGGTGTGGTCGCCGTATTCCACCGCAGTGCCGGCCGGC---TCCACGATGC 59548 |||| || ||| | ||| ||| || ||| |||| || || |||| | Sbjct 14163 GCGGAATATTGCCATAATCGGAGTACGGCAGCGC---GCCGCCCAGCAGTTCCATAGAAC 14107 Query 59549 CCTGGACGATTTCTTGATCTTCCCAGGAGCCAACGGTATCGATGCCGATGATTTCGTCGA 59608 |||| |||| ||||| |||||||| || || | ||| | | ||||| | |||||| Sbjct 14106 CCTGTACGACTTCTTCGTCTTCCCACGATCCGATGGTCGCCAGGCCGACAAGGGCGTCGA 14047 Query 59609 TCTTCCGTGCAGCGGTCATGACCTTCACGAAGCCCGGCAACCAGGTCTGCAGGAACTGGA 59668 | || ||| || |||| |||| |||||||||||| | ||| ||| | |||||||| Sbjct 14046 TTTTACGTACACCGGTAATGAAGCGCACGAAGCCCGGGAGCCATTCCTGTAAGAACTGGA 13987 Query 59669 TGGGAGTCGGGATGGACGGCGTGGT 59693 | || |||| ||| ||||| |||| Sbjct 13986 TCGGCGTCGCGATAGACGGGTTGGT 13962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211348045216320