Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_029015.2
Length=33509
Score E
Sequences producing significant alignments: (Bits) Value
seq2983 136 8e-28
>seq2983
Length=44036
Score = 136 bits (150), Expect = 8e-28
Identities = 282/413 (68%), Gaps = 10/413 (2%)
Strand=Plus/Plus
Query 27562 TGACTGCCTATTACAACGAAATCGATCCCTTCGCCGCGCAATGGCTGCGCAACCTGATCG 27621
|||| ||||| |||||||| |||| || ||||| | ||||| | |||||| | |
Sbjct 42642 TGACAGCCTACTACAACGAGTTCGACCCGTTCGCGGTTGAATGGTTAACCAACCTCAAC- 42700
Query 27622 ACGCTGGGCAC-ATCGCCCCGGGCGTCGTTGACACTCGCTCAATTGAGGAAGTAACCGCA 27680
|| | |||| | || || ||||| | | ||| | || || ||||| ||||| |
Sbjct 42701 ACCCGGGGCGCGATTGCTCCGGGATTTATCGACCCCCGTAGTATCGAGGAGCTAACCCCC 42760
Query 27681 AATGACCTTAAAGGATTCACGCAATGCCACTTCTTTGCCGGGATCGGTGTGTGGTCTTAC 27740
||| |||| | ||| ||| ||| | || ||||||||||| || ||||| |||
Sbjct 42761 TTTGAGCTTACCTATTACACCCAAGTACACCTATTCGCCGGGATCGGCGTCTGGTCCTAC 42820
Query 27741 GCCCTGCGCCGCGCAGGATGGCCCGATGATCGCCCCGTCTGGACAGGTTCATGCCCCTGC 27800
||||||||| || ||||||| || || |||||||||||||| | || ||||| |||
Sbjct 42821 GCCCTGCGCGCTGCCGGATGGCGTGACGACCGCCCCGTCTGGACCTGCTCCTGCCCGTGC 42880
Query 27801 CAGCCTTTCAGCGCCTGCGGAAAGCGACAGGGATTTGACGATCCCCGCCATCATTGGCCC 27860
||||| |||||| |||| || | | ||||| ||||| || || || | ||||||
Sbjct 42881 CAGCCGTTCAGCAGTAGCGGCAAAGGGGACGGATTCGACGACCCGCGACACCTCTGGCCC 42940
Query 27861 TCATG-GGGTCACCTTATTAAGGTGTGTGCGCCTCACGTTGTCTTTGGGGAACAGGTTGC 27919
|| | | ||| || | | | | ||| |||| | ||||| |||||||||
Sbjct 42941 -CACGCAAAACGCCTCATCGAAGAGCGCCGCCCTTTCGTTATTTTTGGCGAACAGGTT-- 42997
Query 27920 AAGCAAAGACGGC---CTCGCATGGCTCGACGCTGTACAGGCTGATCTGGAAA 27969
||| || ||| |||||| ||||| |||||| |||| |||||||
Sbjct 42998 -AGCGCAGGTGGCGCAAATGCATGGTTCGACCTTGTACAAACTGACCTGGAAA 43049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107066550139920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |