Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq157 93.3 3e-14
>seq157
Length=290505
Score = 93.3 bits (102), Expect = 3e-14
Identities = 271/410 (66%), Gaps = 12/410 (3%)
Strand=Plus/Minus
Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533
||||| ||||| |||||||||| ||||| || | || || | || || || |||
Sbjct 145046 TCAATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACAAAATCCCCTGGTCGG 144987
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|| | || | ||||||||||| || || | |||| ||| ||| | |||||| ||
Sbjct 144986 AGATCAGTAATATGAGCAATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGT 144927
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
||||||| ||||| || || | ||||| ||||| ||||| | || || || |||
Sbjct 144926 ACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAATTCTCCATTGGCA 144867
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGA 118713
||| |||| || | ||||| || || ||| |||| | | | | |||||
Sbjct 144866 ACAAAAAATTGTGCAAGACAATGACAAGGTGGTAGAGCCATTTGAGGGATATCGACAGGA 144807
Query 118714 TTCCAGGCTG---TTAAAACATGCC-TTCTGCTATATGG-TTCTACCTGTATACCCTCAA 118768
||||| || | ||| || | ||| || || ||| || | ||| || ||||
Sbjct 144806 TTCCAAGCAGACATTATAATACGCCGATC----ATTTGGATTGTTTCTG-ATTGTGTCAA 144752
Query 118769 TTAAATTCTGAATCTGATCCACACCCTTTCCAGTAT-ACTGAGACTCGCATCCTTTATAT 118827
||| | ||||| ||||| | ||||| | | | |||| || ||| | | ||
Sbjct 144751 TTACTTGCTGAAGTTGATCTATACCCTCATCTTTGTAACTG-TCCTTGCAGTTTCTGTAC 144693
Query 118828 TCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCC 118877
| ||||||||| | ||| |||||||||||||| || || ||||| ||
Sbjct 144692 TTGGCCCCAAAATGACGCCACTGAAAACCATAAACTGGGCCTAGATCACC 144643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414315356105440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |