Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq157 93.3 3e-14 >seq157 Length=290505 Score = 93.3 bits (102), Expect = 3e-14 Identities = 271/410 (66%), Gaps = 12/410 (3%) Strand=Plus/Minus Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533 ||||| ||||| |||||||||| ||||| || | || || | || || || ||| Sbjct 145046 TCAATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACAAAATCCCCTGGTCGG 144987 Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || | || | ||||||||||| || || | |||| ||| ||| | |||||| || Sbjct 144986 AGATCAGTAATATGAGCAATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGT 144927 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||||| ||||| || || | ||||| ||||| ||||| | || || || ||| Sbjct 144926 ACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAATTCTCCATTGGCA 144867 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGA 118713 ||| |||| || | ||||| || || ||| |||| | | | | ||||| Sbjct 144866 ACAAAAAATTGTGCAAGACAATGACAAGGTGGTAGAGCCATTTGAGGGATATCGACAGGA 144807 Query 118714 TTCCAGGCTG---TTAAAACATGCC-TTCTGCTATATGG-TTCTACCTGTATACCCTCAA 118768 ||||| || | ||| || | ||| || || ||| || | ||| || |||| Sbjct 144806 TTCCAAGCAGACATTATAATACGCCGATC----ATTTGGATTGTTTCTG-ATTGTGTCAA 144752 Query 118769 TTAAATTCTGAATCTGATCCACACCCTTTCCAGTAT-ACTGAGACTCGCATCCTTTATAT 118827 ||| | ||||| ||||| | ||||| | | | |||| || ||| | | || Sbjct 144751 TTACTTGCTGAAGTTGATCTATACCCTCATCTTTGTAACTG-TCCTTGCAGTTTCTGTAC 144693 Query 118828 TCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCC 118877 | ||||||||| | ||| |||||||||||||| || || ||||| || Sbjct 144692 TTGGCCCCAAAATGACGCCACTGAAAACCATAAACTGGGCCTAGATCACC 144643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414315356105440